Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 RAD23YEL037C 1197 nt11.15□□□□□ -0.62
VPS53P47061 RPS14BYJL191W 417 nt11.11□□□□□ -0.63
VPS53P47061 UTH1YKR042W 1098 nt11.1□□□□□ -0.63
VPS53P47061 NAR1YNL240C 1476 nt11.1□□□□□ -0.63
VPS53P47061 NBP35YGL091C 987 nt11.06□□□□□ -0.64
VPS53P47061 TIR3YIL011W 810 nt11.06□□□□□ -0.64
VPS53P47061 TSC10YBR265W 963 nt11.05□□□□□ -0.64
VPS53P47061 PRP4YPR178W 1398 nt11.04□□□□□ -0.64
VPS53P47061 AAC1YMR056C 930 nt11.03□□□□□ -0.64
VPS53P47061 RAD51YER095W 1203 nt11.02□□□□□ -0.65
VPS53P47061 YLR437C-AYLR437C-A 228 nt11.02□□□□□ -0.65
VPS53P47061 DUS1YML080W 1272 nt11.02□□□□□ -0.65
VPS53P47061 STE4YOR212W 1272 nt11.01□□□□□ -0.65
VPS53P47061 RPM1RPM1 483 nt11□□□□□ -0.65
VPS53P47061 RIB3YDR487C 627 nt10.99□□□□□ -0.65
VPS53P47061 YGR012WYGR012W 1182 nt10.99□□□□□ -0.65
VPS53P47061 SHH4YLR164W 507 nt10.99□□□□□ -0.65
VPS53P47061 STR3YGL184C 1398 nt10.99□□□□□ -0.65
VPS53P47061 DPS1YLL018C 1674 nt10.98□□□□□ -0.65
VPS53P47061 YML089CYML089C 369 nt10.98□□□□□ -0.65
VPS53P47061 HIP1YGR191W 1812 nt10.96□□□□□ -0.65
VPS53P47061 NRT1YOR071C 1797 nt10.96□□□□□ -0.65
VPS53P47061 TOM6YOR045W 186 nt10.96□□□□□ -0.65
VPS53P47061 YCL074WYCL074W 927 nt10.95□□□□□ -0.66
VPS53P47061 PEX2YJL210W 816 nt10.94□□□□□ -0.66
VPS53P47061 YNR029CYNR029C 1290 nt10.94□□□□□ -0.66
VPS53P47061 RDN18-1RDN18-1 1800 nt10.93□□□□□ -0.66
VPS53P47061 RDN18-2RDN18-2 1800 nt10.93□□□□□ -0.66
VPS53P47061 BIO5YNR056C 1686 nt10.93□□□□□ -0.66
VPS53P47061 FUN14YAL008W 597 nt10.93□□□□□ -0.66
VPS53P47061 AQY2YLL052C 450 nt10.93□□□□□ -0.66
VPS53P47061 POM34YLR018C 900 nt10.93□□□□□ -0.66
VPS53P47061 YLR349WYLR349W 507 nt10.93□□□□□ -0.66
VPS53P47061 LSC2YGR244C 1284 nt10.92□□□□□ -0.66
VPS53P47061 MET28YIR017C 564 nt10.91□□□□□ -0.66
VPS53P47061 YJL195CYJL195C 702 nt10.89□□□□□ -0.67
VPS53P47061 BMT6YLR063W 1098 nt10.89□□□□□ -0.67
VPS53P47061 SNF1YDR477W 1902 nt10.88□□□□□ -0.67
VPS53P47061 ADH7YCR105W 1086 nt10.88□□□□□ -0.67
VPS53P47061 PBP1YGR178C 2169 nt10.87□□□□□ -0.67
VPS53P47061 CAB5YDR196C 726 nt10.86□□□□□ -0.67
VPS53P47061 PRO1YDR300C 1287 nt10.85□□□□□ -0.67
VPS53P47061 YLR279WYLR279W 390 nt10.85□□□□□ -0.67
VPS53P47061 FIT3YOR383C 615 nt10.85□□□□□ -0.67
VPS53P47061 YPL222C-AYPL222C-A 246 nt10.84□□□□□ -0.67
VPS53P47061 TIF6YPR016C 738 nt10.84□□□□□ -0.67
VPS53P47061 PAU15YIR041W 375 nt10.83□□□□□ -0.68
VPS53P47061 ARP6YLR085C 1317 nt10.83□□□□□ -0.68
VPS53P47061 ATG15YCR068W 1563 nt10.82□□□□□ -0.68
VPS53P47061 YKR005CYKR005C 1578 nt10.82□□□□□ -0.68
VPS53P47061 YPI1YFR003C 468 nt10.81□□□□□ -0.68
VPS53P47061 CYT2YKL087C 675 nt10.81□□□□□ -0.68
VPS53P47061 ADH1YOL086C 1047 nt10.79□□□□□ -0.68
VPS53P47061 MSB4YOL112W 1479 nt10.77□□□□□ -0.69
VPS53P47061 RTN2YDL204W 1182 nt10.76□□□□□ -0.69
VPS53P47061 YEL008WYEL008W 381 nt10.74□□□□□ -0.69
VPS53P47061 CMP2YML057W 1815 nt10.74□□□□□ -0.69
VPS53P47061 GAP1YKR039W 1809 nt10.72□□□□□ -0.69
VPS53P47061 YGR259CYGR259C 441 nt10.72□□□□□ -0.69
VPS53P47061 GND1YHR183W 1470 nt10.71□□□□□ -0.69
VPS53P47061 CPD1YGR247W 720 nt10.7□□□□□ -0.7
VPS53P47061 LOT5YKL183W 921 nt10.7□□□□□ -0.7
VPS53P47061 GPN2YOR262W 1044 nt10.69□□□□□ -0.7
VPS53P47061 PLB1YMR008C 1995 nt10.68□□□□□ -0.7
VPS53P47061 HSL7YBR133C 2484 nt10.66□□□□□ -0.7
VPS53P47061 tS(GCU)LtS(GCU)L 80 nt10.65□□□□□ -0.7
VPS53P47061 ESS1YJR017C 513 nt10.65□□□□□ -0.7
VPS53P47061 IRC24YIR036C 792 nt10.64□□□□□ -0.71
VPS53P47061 ALP1YNL270C 1722 nt10.61□□□□□ -0.71
VPS53P47061 YAT1YAR035W 2064 nt10.61□□□□□ -0.71
VPS53P47061 YAR028WYAR028W 705 nt10.6□□□□□ -0.71
VPS53P47061 DIF1YLR437C 402 nt10.59□□□□□ -0.71
VPS53P47061 APT2YDR441C 546 nt10.55□□□□□ -0.72
VPS53P47061 NAP1YKR048C 1254 nt10.55□□□□□ -0.72
VPS53P47061 UTR1YJR049C 1593 nt10.55□□□□□ -0.72
VPS53P47061 LSB3YFR024C-A 1380 nt10.53□□□□□ -0.72
VPS53P47061 SMM1YNR015W 1155 nt10.53□□□□□ -0.72
VPS53P47061 AKR2YOR034C 2250 nt10.53□□□□□ -0.72
VPS53P47061 MTG2YHR168W 1557 nt10.51□□□□□ -0.73
VPS53P47061 ZTA1YBR046C 1005 nt10.5□□□□□ -0.73
VPS53P47061 FCY21YER060W 1587 nt10.5□□□□□ -0.73
VPS53P47061 SEN2YLR105C 1134 nt10.48□□□□□ -0.73
VPS53P47061 RIB2YOL066C 1776 nt10.45□□□□□ -0.74
VPS53P47061 SAM35YHR083W 990 nt10.43□□□□□ -0.74
VPS53P47061 HXT12YIL170W 1374 nt10.42□□□□□ -0.74
VPS53P47061 RDN25-1RDN25-1 3396 nt10.41□□□□□ -0.74
VPS53P47061 RDN25-2RDN25-2 3396 nt10.41□□□□□ -0.74
VPS53P47061 PUP1YOR157C 786 nt10.41□□□□□ -0.74
VPS53P47061 PRM5YIL117C 957 nt10.4□□□□□ -0.74
VPS53P47061 CSM2YIL132C 642 nt10.4□□□□□ -0.74
VPS53P47061 PRY1YJL079C 900 nt10.39□□□□□ -0.75
VPS53P47061 SED1YDR077W 1017 nt10.38□□□□□ -0.75
VPS53P47061 VRG4YGL225W 1014 nt10.38□□□□□ -0.75
VPS53P47061 PAU5YFL020C 369 nt10.35□□□□□ -0.75
VPS53P47061 STP3YLR375W 1032 nt10.35□□□□□ -0.75
VPS53P47061 PGC1YPL206C 966 nt10.35□□□□□ -0.75
VPS53P47061 YBR232CYBR232C 360 nt10.35□□□□□ -0.75
VPS53P47061 SPT20YOL148C 1815 nt10.35□□□□□ -0.75
VPS53P47061 HEL2YDR266C 1920 nt10.35□□□□□ -0.75
VPS53P47061 YER190C-AYER190C-A 576 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 101.8 ms