Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 HIP1YGR191W 1812 nt17.27■□□□□ 0.35
SSN2P38931 YGR012WYGR012W 1182 nt17.26■□□□□ 0.35
SSN2P38931 POM34YLR018C 900 nt17.25■□□□□ 0.35
SSN2P38931 ATG15YCR068W 1563 nt17.25■□□□□ 0.35
SSN2P38931 YCL074WYCL074W 927 nt17.24■□□□□ 0.35
SSN2P38931 CLB6YGR109C 1143 nt17.24■□□□□ 0.35
SSN2P38931 NRT1YOR071C 1797 nt17.22■□□□□ 0.35
SSN2P38931 YLR437C-AYLR437C-A 228 nt17.21■□□□□ 0.34
SSN2P38931 TIF6YPR016C 738 nt17.14■□□□□ 0.33
SSN2P38931 TSC10YBR265W 963 nt17.14■□□□□ 0.33
SSN2P38931 MSB4YOL112W 1479 nt17.14■□□□□ 0.33
SSN2P38931 RAD23YEL037C 1197 nt17.13■□□□□ 0.33
SSN2P38931 YLR279WYLR279W 390 nt17.12■□□□□ 0.33
SSN2P38931 FUR4YBR021W 1902 nt17.11■□□□□ 0.33
SSN2P38931 YML089CYML089C 369 nt17.03■□□□□ 0.32
SSN2P38931 ZTA1YBR046C 1005 nt17.01■□□□□ 0.31
SSN2P38931 MET28YIR017C 564 nt17■□□□□ 0.31
SSN2P38931 LSC2YGR244C 1284 nt16.98■□□□□ 0.31
SSN2P38931 PLB1YMR008C 1995 nt16.98■□□□□ 0.31
SSN2P38931 YLR349WYLR349W 507 nt16.96■□□□□ 0.31
SSN2P38931 YNR029CYNR029C 1290 nt16.96■□□□□ 0.31
SSN2P38931 GAP1YKR039W 1809 nt16.96■□□□□ 0.31
SSN2P38931 STE4YOR212W 1272 nt16.95■□□□□ 0.3
SSN2P38931 ARP6YLR085C 1317 nt16.94■□□□□ 0.3
SSN2P38931 RTN2YDL204W 1182 nt16.94■□□□□ 0.3
SSN2P38931 RIB3YDR487C 627 nt16.93■□□□□ 0.3
SSN2P38931 ADH7YCR105W 1086 nt16.92■□□□□ 0.3
SSN2P38931 AKR2YOR034C 2250 nt16.88■□□□□ 0.29
SSN2P38931 LOT5YKL183W 921 nt16.87■□□□□ 0.29
SSN2P38931 AAC1YMR056C 930 nt16.86■□□□□ 0.29
SSN2P38931 PAU15YIR041W 375 nt16.8■□□□□ 0.28
SSN2P38931 YJL195CYJL195C 702 nt16.8■□□□□ 0.28
SSN2P38931 YPL222C-AYPL222C-A 246 nt16.8■□□□□ 0.28
SSN2P38931 DIF1YLR437C 402 nt16.79■□□□□ 0.28
SSN2P38931 UTR1YJR049C 1593 nt16.79■□□□□ 0.28
SSN2P38931 RPM1RPM1 483 nt16.79■□□□□ 0.28
SSN2P38931 ADH1YOL086C 1047 nt16.79■□□□□ 0.28
SSN2P38931 GPN2YOR262W 1044 nt16.79■□□□□ 0.28
SSN2P38931 YKR005CYKR005C 1578 nt16.78■□□□□ 0.28
SSN2P38931 FIT3YOR383C 615 nt16.77■□□□□ 0.27
SSN2P38931 YGR259CYGR259C 441 nt16.75■□□□□ 0.27
SSN2P38931 APT2YDR441C 546 nt16.74■□□□□ 0.27
SSN2P38931 FUN14YAL008W 597 nt16.74■□□□□ 0.27
SSN2P38931 YAR028WYAR028W 705 nt16.72■□□□□ 0.27
SSN2P38931 GND1YHR183W 1470 nt16.69■□□□□ 0.26
SSN2P38931 PRM5YIL117C 957 nt16.68■□□□□ 0.26
SSN2P38931 MTG2YHR168W 1557 nt16.66■□□□□ 0.26
SSN2P38931 YPI1YFR003C 468 nt16.63■□□□□ 0.25
SSN2P38931 UGA4YDL210W 1716 nt16.62■□□□□ 0.25
SSN2P38931 SMM1YNR015W 1155 nt16.62■□□□□ 0.25
SSN2P38931 YER190C-AYER190C-A 576 nt16.61■□□□□ 0.25
SSN2P38931 YGR296C-AYGR296C-A 576 nt16.61■□□□□ 0.25
SSN2P38931 YML133W-AYML133W-A 576 nt16.61■□□□□ 0.25
SSN2P38931 YNL339W-AYNL339W-A 576 nt16.61■□□□□ 0.25
SSN2P38931 YPL283W-AYPL283W-A 576 nt16.61■□□□□ 0.25
SSN2P38931 RIB2YOL066C 1776 nt16.6■□□□□ 0.25
SSN2P38931 HSP60YLR259C 1719 nt16.59■□□□□ 0.25
SSN2P38931 ALP1YNL270C 1722 nt16.56■□□□□ 0.24
SSN2P38931 PRY1YJL079C 900 nt16.55■□□□□ 0.24
SSN2P38931 LSB3YFR024C-A 1380 nt16.54■□□□□ 0.24
SSN2P38931 PRP4YPR178W 1398 nt16.53■□□□□ 0.24
SSN2P38931 YJL055WYJL055W 738 nt16.53■□□□□ 0.24
SSN2P38931 PAC11YDR488C 1602 nt16.49■□□□□ 0.23
SSN2P38931 YEL008WYEL008W 381 nt16.48■□□□□ 0.23
SSN2P38931 SED1YDR077W 1017 nt16.46■□□□□ 0.23
SSN2P38931 CPD1YGR247W 720 nt16.46■□□□□ 0.23
SSN2P38931 tS(GCU)LtS(GCU)L 80 nt16.45■□□□□ 0.22
SSN2P38931 DPS1YLL018C 1674 nt16.44■□□□□ 0.22
SSN2P38931 FCY21YER060W 1587 nt16.42■□□□□ 0.22
SSN2P38931 BMT6YLR063W 1098 nt16.42■□□□□ 0.22
SSN2P38931 YPL251WYPL251W 303 nt16.42■□□□□ 0.22
SSN2P38931 MEP3YPR138C 1470 nt16.36■□□□□ 0.21
SSN2P38931 VRG4YGL225W 1014 nt16.35■□□□□ 0.21
SSN2P38931 SAM35YHR083W 990 nt16.35■□□□□ 0.21
SSN2P38931 LIP1YMR298W 453 nt16.34■□□□□ 0.21
SSN2P38931 SNF1YDR477W 1902 nt16.31■□□□□ 0.2
SSN2P38931 ESS1YJR017C 513 nt16.31■□□□□ 0.2
SSN2P38931 YBL086CYBL086C 1401 nt16.3■□□□□ 0.2
SSN2P38931 YMR103CYMR103C 363 nt16.28■□□□□ 0.2
SSN2P38931 ALD4YOR374W 1560 nt16.27■□□□□ 0.19
SSN2P38931 HXT12YIL170W 1374 nt16.24■□□□□ 0.19
SSN2P38931 TOA2YKL058W 369 nt16.22■□□□□ 0.19
SSN2P38931 HXT1YHR094C 1713 nt16.21■□□□□ 0.19
SSN2P38931 PAU5YFL020C 369 nt16.18■□□□□ 0.18
SSN2P38931 BRR1YPR057W 1026 nt16.18■□□□□ 0.18
SSN2P38931 GND2YGR256W 1479 nt16.15■□□□□ 0.18
SSN2P38931 DBP1YPL119C 1854 nt16.15■□□□□ 0.18
SSN2P38931 HIF1YLL022C 1158 nt16.14■□□□□ 0.17
SSN2P38931 PGC1YPL206C 966 nt16.14■□□□□ 0.17
SSN2P38931 CSM1YCR086W 573 nt16.13■□□□□ 0.17
SSN2P38931 IRC24YIR036C 792 nt16.13■□□□□ 0.17
SSN2P38931 YJL118WYJL118W 660 nt16.12■□□□□ 0.17
SSN2P38931 BOR1YNL275W 1731 nt16.12■□□□□ 0.17
SSN2P38931 SEN2YLR105C 1134 nt16.11■□□□□ 0.17
SSN2P38931 SSN3YPL042C 1668 nt16.1■□□□□ 0.17
SSN2P38931 BNI5YNL166C 1347 nt16.07■□□□□ 0.16
SSN2P38931 SAM3YPL274W 1764 nt16.05■□□□□ 0.16
SSN2P38931 GAL3YDR009W 1563 nt16.04■□□□□ 0.16
SSN2P38931 LSB5YCL034W 1065 nt16.04■□□□□ 0.16
SSN2P38931 THI72YOR192C 1800 nt16.04■□□□□ 0.16
Retrieved 100 of 7,029 protein–RNA pairs in 65 ms