Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC010141.3-201ENST00000456659 717 ntBASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LTBP4Q8N2S1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LTBP4Q8N2S1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LTBP4Q8N2S1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
LTBP4Q8N2S1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.86■■■□□ 2.53
LTBP4Q8N2S1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.86■■■□□ 2.53
LTBP4Q8N2S1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LTBP4Q8N2S1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 TERF1P5-201ENST00000477545 1207 ntBASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.85■■■□□ 2.53
LTBP4Q8N2S1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
LTBP4Q8N2S1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
LTBP4Q8N2S1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.84■■■□□ 2.53
LTBP4Q8N2S1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.84■■■□□ 2.53
LTBP4Q8N2S1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.84■■■□□ 2.53
LTBP4Q8N2S1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 KRT18P35-201ENST00000510488 1269 ntBASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
LTBP4Q8N2S1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.53
LTBP4Q8N2S1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 RPPH1-201ENST00000516869 333 ntBASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 AC144652.1-201ENST00000609974 1624 ntBASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
LTBP4Q8N2S1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 LINC01529-204ENST00000636474 1715 ntBASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
LTBP4Q8N2S1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 AC012306.2-201ENST00000609350 630 ntBASIC30.8■■■□□ 2.52
LTBP4Q8N2S1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTBP4Q8N2S1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
LTBP4Q8N2S1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
LTBP4Q8N2S1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.79■■■□□ 2.52
LTBP4Q8N2S1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTBP4Q8N2S1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTBP4Q8N2S1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
LTBP4Q8N2S1 AC069236.1-201ENST00000604339 616 ntBASIC30.78■■■□□ 2.52
LTBP4Q8N2S1 FAM197Y4-202ENST00000622692 608 ntBASIC30.78■■■□□ 2.52
LTBP4Q8N2S1 AC138907.5-202ENST00000569484 235 ntBASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.77■■■□□ 2.52
LTBP4Q8N2S1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
LTBP4Q8N2S1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.76■■■□□ 2.52
LTBP4Q8N2S1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
LTBP4Q8N2S1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.76■■■□□ 2.52
LTBP4Q8N2S1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.76■■■□□ 2.52
LTBP4Q8N2S1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms