Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NIPAL1Q6NVV3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.83■□□□□ 0.92
NIPAL1Q6NVV3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 AC008764.7-201ENST00000593779 1081 ntBASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.82■□□□□ 0.92
NIPAL1Q6NVV3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 AC099791.1-201ENST00000416440 715 ntBASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 AC126544.1-201ENST00000580842 1059 ntBASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 AL031602.1-201ENST00000633169 911 ntBASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.81■□□□□ 0.92
NIPAL1Q6NVV3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
NIPAL1Q6NVV3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL1Q6NVV3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 LINC00526-201ENST00000581067 1875 ntBASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 CA15P2-201ENST00000611168 834 ntBASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NIPAL1Q6NVV3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 IGHV3-19-201ENST00000521488 291 ntBASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NIPAL1Q6NVV3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 AC010525.1-201ENST00000585559 441 ntBASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL1Q6NVV3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms