Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 PRP18YGR006W 756 nt3.61□□□□□ -1.83
CAF40P53829 SPC2YML055W 537 nt3.61□□□□□ -1.83
CAF40P53829 SUI1YNL244C 327 nt3.61□□□□□ -1.83
CAF40P53829 RPC34YNR003C 954 nt3.61□□□□□ -1.83
CAF40P53829 ATG34YOL083W 1239 nt3.61□□□□□ -1.83
CAF40P53829 YOL107WYOL107W 1029 nt3.61□□□□□ -1.83
CAF40P53829 IRC13YOR235W 315 nt3.61□□□□□ -1.83
CAF40P53829 RAD54YGL163C 2697 nt3.61□□□□□ -1.83
CAF40P53829 TUB2YFL037W 1374 nt3.61□□□□□ -1.83
CAF40P53829 YOR022CYOR022C 2148 nt3.61□□□□□ -1.83
CAF40P53829 MEK1YOR351C 1494 nt3.6□□□□□ -1.83
CAF40P53829 SWI3YJL176C 2478 nt3.6□□□□□ -1.83
CAF40P53829 ARO2YGL148W 1131 nt3.6□□□□□ -1.83
CAF40P53829 YGR111WYGR111W 1203 nt3.6□□□□□ -1.83
CAF40P53829 YML047W-AYML047W-A 366 nt3.6□□□□□ -1.83
CAF40P53829 SAP30YMR263W 606 nt3.6□□□□□ -1.83
CAF40P53829 END3YNL084C 1050 nt3.6□□□□□ -1.83
CAF40P53829 TMC1YOR052C 453 nt3.6□□□□□ -1.83
CAF40P53829 FAA1YOR317W 2103 nt3.6□□□□□ -1.83
CAF40P53829 TAZ1YPR140W 1146 nt3.6□□□□□ -1.83
CAF40P53829 MNT4YNR059W 1743 nt3.6□□□□□ -1.83
CAF40P53829 CLG1YGL215W 1359 nt3.6□□□□□ -1.83
CAF40P53829 GAC1YOR178C 2382 nt3.6□□□□□ -1.83
CAF40P53829 NUP159YIL115C 4383 nt3.6□□□□□ -1.83
CAF40P53829 YMR221CYMR221C 1515 nt3.6□□□□□ -1.83
CAF40P53829 DHR2YKL078W 2208 nt3.59□□□□□ -1.83
CAF40P53829 YCL075WYCL075W 441 nt3.59□□□□□ -1.83
CAF40P53829 PRP11YDL043C 801 nt3.59□□□□□ -1.83
CAF40P53829 TAF10YDR167W 621 nt3.59□□□□□ -1.83
CAF40P53829 CBS2YDR197W 1170 nt3.59□□□□□ -1.83
CAF40P53829 RPL24AYGL031C 468 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)CtQ(UUG)C 72 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)D1tQ(UUG)D1 72 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)D2tQ(UUG)D2 72 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)D3tQ(UUG)D3 72 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)E1tQ(UUG)E1 72 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)HtQ(UUG)H 72 nt3.59□□□□□ -1.83
CAF40P53829 tQ(UUG)LtQ(UUG)L 72 nt3.59□□□□□ -1.83
CAF40P53829 tS(AGA)D3tS(AGA)D3 83 nt3.59□□□□□ -1.83
CAF40P53829 RFA3YJL173C 369 nt3.59□□□□□ -1.83
CAF40P53829 IRC25YLR021W 540 nt3.59□□□□□ -1.83
CAF40P53829 SMD3YLR147C 306 nt3.59□□□□□ -1.83
CAF40P53829 CCS1YMR038C 750 nt3.59□□□□□ -1.83
CAF40P53829 ATG5YPL149W 885 nt3.59□□□□□ -1.83
CAF40P53829 ATM1YMR301C 2073 nt3.59□□□□□ -1.83
CAF40P53829 SPT6YGR116W 4356 nt3.59□□□□□ -1.84
CAF40P53829 MEF1YLR069C 2286 nt3.59□□□□□ -1.84
CAF40P53829 ALO1YML086C 1581 nt3.59□□□□□ -1.84
CAF40P53829 HAP4YKL109W 1665 nt3.59□□□□□ -1.84
CAF40P53829 MAL12YGR292W 1755 nt3.58□□□□□ -1.84
CAF40P53829 MAL32YBR299W 1755 nt3.58□□□□□ -1.84
CAF40P53829 HPR1YDR138W 2259 nt3.58□□□□□ -1.84
CAF40P53829 YCR007CYCR007C 720 nt3.58□□□□□ -1.84
CAF40P53829 KXD1YGL079W 657 nt3.58□□□□□ -1.84
CAF40P53829 CAP2YIL034C 864 nt3.58□□□□□ -1.84
CAF40P53829 YLR428CYLR428C 345 nt3.58□□□□□ -1.84
CAF40P53829 OPY1YBR129C 987 nt3.58□□□□□ -1.84
CAF40P53829 snR44snR44 211 nt3.58□□□□□ -1.84
CAF40P53829 KRE29YER038C 1395 nt3.58□□□□□ -1.84
CAF40P53829 ATG21YPL100W 1491 nt3.58□□□□□ -1.84
CAF40P53829 DRN1YGR093W 1524 nt3.58□□□□□ -1.84
CAF40P53829 RTC1YOL138C 4026 nt3.58□□□□□ -1.84
CAF40P53829 PMS1YNL082W 2622 nt3.57□□□□□ -1.84
CAF40P53829 ECM16YMR128W 3804 nt3.57□□□□□ -1.84
CAF40P53829 BUD5YCR038C 1929 nt3.57□□□□□ -1.84
CAF40P53829 DET1YDR051C 1005 nt3.57□□□□□ -1.84
CAF40P53829 ROK1YGL171W 1695 nt3.57□□□□□ -1.84
CAF40P53829 YIL171WYIL171W 330 nt3.57□□□□□ -1.84
CAF40P53829 DAL3YIR032C 588 nt3.57□□□□□ -1.84
CAF40P53829 VPS25YJR102C 609 nt3.57□□□□□ -1.84
CAF40P53829 YKR070WYKR070W 1059 nt3.57□□□□□ -1.84
CAF40P53829 RNA14YMR061W 2034 nt3.57□□□□□ -1.84
CAF40P53829 NUF2YOL069W 1356 nt3.57□□□□□ -1.84
CAF40P53829 PFK27YOL136C 1194 nt3.57□□□□□ -1.84
CAF40P53829 CCL1YPR025C 1182 nt3.57□□□□□ -1.84
CAF40P53829 SUP45YBR143C 1314 nt3.57□□□□□ -1.84
CAF40P53829 BRE4YDL231C 3378 nt3.57□□□□□ -1.84
CAF40P53829 RAD26YJR035W 3258 nt3.57□□□□□ -1.84
CAF40P53829 ARF2YDL137W 546 nt3.56□□□□□ -1.84
CAF40P53829 NOP6YDL213C 678 nt3.56□□□□□ -1.84
CAF40P53829 YGL188CYGL188C 174 nt3.56□□□□□ -1.84
CAF40P53829 AIM22YJL046W 1230 nt3.56□□□□□ -1.84
CAF40P53829 GAT3YLR013W 426 nt3.56□□□□□ -1.84
CAF40P53829 RPB8YOR224C 441 nt3.56□□□□□ -1.84
CAF40P53829 MED8YBR193C 672 nt3.56□□□□□ -1.84
CAF40P53829 RPL35BYDL136W 363 nt3.55□□□□□ -1.84
CAF40P53829 TOS8YGL096W 831 nt3.55□□□□□ -1.84
CAF40P53829 COS8YHL048W 1146 nt3.55□□□□□ -1.84
CAF40P53829 VPS29YHR012W 849 nt3.55□□□□□ -1.84
CAF40P53829 UMP1YBR173C 447 nt3.55□□□□□ -1.84
CAF40P53829 CET1YPL228W 1650 nt3.55□□□□□ -1.84
CAF40P53829 MCD4YKL165C 2760 nt3.55□□□□□ -1.84
CAF40P53829 APN2YBL019W 1563 nt3.55□□□□□ -1.84
CAF40P53829 YFR057WYFR057W 456 nt3.54□□□□□ -1.84
CAF40P53829 YGL108CYGL108C 423 nt3.54□□□□□ -1.84
CAF40P53829 YIL165CYIL165C 360 nt3.54□□□□□ -1.84
CAF40P53829 YIR023C-AYIR023C-A 324 nt3.54□□□□□ -1.84
CAF40P53829 MTR2YKL186C 555 nt3.54□□□□□ -1.84
CAF40P53829 YAL065CYAL065C 387 nt3.54□□□□□ -1.84
CAF40P53829 GPN3YLR243W 819 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 30.9 ms