Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 TSR1YDL060W 2367 nt3.14□□□□□ -1.91
CUE1P38428 SSL1YLR005W 1386 nt3.13□□□□□ -1.91
CUE1P38428 SSU1YPL092W 1377 nt3.13□□□□□ -1.91
CUE1P38428 FAS1YKL182W 6156 nt3.13□□□□□ -1.91
CUE1P38428 YCR007CYCR007C 720 nt3.13□□□□□ -1.91
CUE1P38428 PFA4YOL003C 1137 nt3.13□□□□□ -1.91
CUE1P38428 MED7YOL135C 669 nt3.13□□□□□ -1.91
CUE1P38428 NOG1YPL093W 1944 nt3.13□□□□□ -1.91
CUE1P38428 MPC54YOR177C 1395 nt3.12□□□□□ -1.91
CUE1P38428 BYE1YKL005C 1785 nt3.12□□□□□ -1.91
CUE1P38428 REB1YBR049C 2433 nt3.12□□□□□ -1.91
CUE1P38428 ERG5YMR015C 1617 nt3.12□□□□□ -1.91
CUE1P38428 ALA1YOR335C 2877 nt3.12□□□□□ -1.91
CUE1P38428 FAD1YDL045C 921 nt3.12□□□□□ -1.91
CUE1P38428 CWC2YDL209C 1020 nt3.12□□□□□ -1.91
CUE1P38428 CPR1YDR155C 489 nt3.12□□□□□ -1.91
CUE1P38428 YDR271CYDR271C 372 nt3.12□□□□□ -1.91
CUE1P38428 YDR431WYDR431W 312 nt3.12□□□□□ -1.91
CUE1P38428 ERG26YGL001C 1050 nt3.12□□□□□ -1.91
CUE1P38428 MRP8YKL142W 660 nt3.12□□□□□ -1.91
CUE1P38428 CPR8YNR028W 927 nt3.12□□□□□ -1.91
CUE1P38428 LDS2YOL047C 1071 nt3.12□□□□□ -1.91
CUE1P38428 YPL162CYPL162C 822 nt3.12□□□□□ -1.91
CUE1P38428 FDH2YPL275W 711 nt3.12□□□□□ -1.91
CUE1P38428 PDR12YPL058C 4536 nt3.12□□□□□ -1.91
CUE1P38428 RRP5YMR229C 5190 nt3.12□□□□□ -1.91
CUE1P38428 ZDS2YML109W 2829 nt3.12□□□□□ -1.91
CUE1P38428 AGA1YNR044W 2178 nt3.12□□□□□ -1.91
CUE1P38428 TED1YIL039W 1422 nt3.11□□□□□ -1.91
CUE1P38428 PHO5YBR093C 1404 nt3.11□□□□□ -1.91
CUE1P38428 HDA2YDR295C 2025 nt3.11□□□□□ -1.91
CUE1P38428 MRPL11YDL202W 750 nt3.11□□□□□ -1.91
CUE1P38428 FCF1YDR339C 570 nt3.11□□□□□ -1.91
CUE1P38428 PET130YJL023C 1044 nt3.11□□□□□ -1.91
CUE1P38428 FLD1YLR404W 858 nt3.11□□□□□ -1.91
CUE1P38428 YPT7YML001W 627 nt3.11□□□□□ -1.91
CUE1P38428 RRG9YNL213C 645 nt3.11□□□□□ -1.91
CUE1P38428 GPI1YGR216C 1830 nt3.11□□□□□ -1.91
CUE1P38428 CLB5YPR120C 1308 nt3.11□□□□□ -1.91
CUE1P38428 CPA2YJR109C 3357 nt3.1□□□□□ -1.91
CUE1P38428 CHK1YBR274W 1584 nt3.1□□□□□ -1.91
CUE1P38428 YCR085WYCR085W 354 nt3.1□□□□□ -1.91
CUE1P38428 HOM2YDR158W 1098 nt3.1□□□□□ -1.91
CUE1P38428 YDR282CYDR282C 1245 nt3.1□□□□□ -1.91
CUE1P38428 SUP56tL(CAA)A 82 nt3.1□□□□□ -1.91
CUE1P38428 SUP53tL(CAA)C 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)DtL(CAA)D 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)G1tL(CAA)G1 82 nt3.1□□□□□ -1.91
CUE1P38428 SUP54tL(CAA)G2 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)G3tL(CAA)G3 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)KtL(CAA)K 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)LtL(CAA)L 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)MtL(CAA)M 82 nt3.1□□□□□ -1.91
CUE1P38428 tL(CAA)NtL(CAA)N 82 nt3.1□□□□□ -1.91
CUE1P38428 YGR126WYGR126W 693 nt3.1□□□□□ -1.91
CUE1P38428 LSM1YJL124C 519 nt3.1□□□□□ -1.91
CUE1P38428 YJR037WYJR037W 384 nt3.1□□□□□ -1.91
CUE1P38428 RSF1YMR030W 1131 nt3.1□□□□□ -1.91
CUE1P38428 TVP18YMR071C 504 nt3.1□□□□□ -1.91
CUE1P38428 YMR084WYMR084W 789 nt3.1□□□□□ -1.91
CUE1P38428 OSW1YOR255W 837 nt3.1□□□□□ -1.91
CUE1P38428 YOR314WYOR314W 330 nt3.1□□□□□ -1.91
CUE1P38428 YBR242WYBR242W 717 nt3.1□□□□□ -1.91
CUE1P38428 PWP2YCR057C 2772 nt3.1□□□□□ -1.91
CUE1P38428 ASI1YMR119W 1875 nt3.09□□□□□ -1.91
CUE1P38428 MIG1YGL035C 1515 nt3.09□□□□□ -1.91
CUE1P38428 YVC1YOR087W 2028 nt3.09□□□□□ -1.91
CUE1P38428 FRQ1YDR373W 573 nt3.09□□□□□ -1.91
CUE1P38428 MMS21YEL019C 804 nt3.09□□□□□ -1.91
CUE1P38428 ARD1YHR013C 717 nt3.09□□□□□ -1.91
CUE1P38428 YHR173CYHR173C 339 nt3.09□□□□□ -1.91
CUE1P38428 BET1YIL004C 429 nt3.09□□□□□ -1.91
CUE1P38428 YKT6YKL196C 603 nt3.09□□□□□ -1.91
CUE1P38428 YLR049CYLR049C 1287 nt3.09□□□□□ -1.91
CUE1P38428 COQ5YML110C 924 nt3.09□□□□□ -1.91
CUE1P38428 YPL168WYPL168W 1293 nt3.09□□□□□ -1.91
CUE1P38428 DIB1YPR082C 432 nt3.09□□□□□ -1.91
CUE1P38428 GYP6YJL044C 1377 nt3.09□□□□□ -1.92
CUE1P38428 YOL019WYOL019W 1656 nt3.08□□□□□ -1.92
CUE1P38428 ISM1YPL040C 3009 nt3.08□□□□□ -1.92
CUE1P38428 MSW1YDR268W 1140 nt3.08□□□□□ -1.92
CUE1P38428 LSM6YDR378C 261 nt3.08□□□□□ -1.92
CUE1P38428 YHR214C-EYHR214C-E 300 nt3.08□□□□□ -1.92
CUE1P38428 YJR111CYJR111C 852 nt3.08□□□□□ -1.92
CUE1P38428 ERP1YAR002C-A 660 nt3.08□□□□□ -1.92
CUE1P38428 BUR2YLR226W 1188 nt3.08□□□□□ -1.92
CUE1P38428 YAR070CYAR070C 300 nt3.08□□□□□ -1.92
CUE1P38428 USV1YPL230W 1176 nt3.08□□□□□ -1.92
CUE1P38428 YPR077CYPR077C 372 nt3.08□□□□□ -1.92
CUE1P38428 HMS1YOR032C 1305 nt3.08□□□□□ -1.92
CUE1P38428 POL2YNL262W 6669 nt3.08□□□□□ -1.92
CUE1P38428 LTV1YKL143W 1392 nt3.08□□□□□ -1.92
CUE1P38428 CTK1YKL139W 1587 nt3.08□□□□□ -1.92
CUE1P38428 BAR1YIL015W 1764 nt3.07□□□□□ -1.92
CUE1P38428 IMH1YLR309C 2736 nt3.07□□□□□ -1.92
CUE1P38428 IES6YEL044W 501 nt3.07□□□□□ -1.92
CUE1P38428 YEL074WYEL074W 339 nt3.07□□□□□ -1.92
CUE1P38428 PEX21YGR239C 867 nt3.07□□□□□ -1.92
CUE1P38428 tV(CAC)DtV(CAC)D 73 nt3.07□□□□□ -1.92
CUE1P38428 tV(CAC)HtV(CAC)H 73 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms