Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TFF1P04155 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TFF1P04155 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TFF1P04155 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TFF1P04155 BX842568.3-201ENST00000418104 571 ntBASIC18.23■□□□□ 0.51
TFF1P04155 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TFF1P04155 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.23■□□□□ 0.51
TFF1P04155 AC126544.1-201ENST00000580842 1059 ntBASIC18.23■□□□□ 0.51
TFF1P04155 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TFF1P04155 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TFF1P04155 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TFF1P04155 AC242852.2-201ENST00000615738 1807 ntBASIC18.23■□□□□ 0.51
TFF1P04155 ECEL1P1-201ENST00000373592 1742 ntBASIC18.23■□□□□ 0.51
TFF1P04155 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 LINC00526-201ENST00000581067 1875 ntBASIC18.22■□□□□ 0.51
TFF1P04155 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TFF1P04155 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.22■□□□□ 0.51
TFF1P04155 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.22■□□□□ 0.51
TFF1P04155 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TFF1P04155 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TFF1P04155 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TFF1P04155 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TFF1P04155 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.21■□□□□ 0.51
TFF1P04155 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TFF1P04155 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 MIR638-201ENST00000385237 100 ntBASIC18.21■□□□□ 0.51
TFF1P04155 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.21■□□□□ 0.51
TFF1P04155 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TFF1P04155 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
TFF1P04155 CA15P2-201ENST00000611168 834 ntBASIC18.21■□□□□ 0.51
TFF1P04155 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 AL355001.2-201ENST00000620617 1191 ntBASIC18.21■□□□□ 0.51
TFF1P04155 AL136967.2-201ENST00000623968 743 ntBASIC18.21■□□□□ 0.51
TFF1P04155 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.21■□□□□ 0.51
TFF1P04155 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
TFF1P04155 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TFF1P04155 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.21■□□□□ 0.51
TFF1P04155 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TFF1P04155 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.2■□□□□ 0.5
TFF1P04155 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.2■□□□□ 0.5
TFF1P04155 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.2■□□□□ 0.5
TFF1P04155 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.2■□□□□ 0.5
TFF1P04155 EDA-201ENST00000338901 1233 ntBASIC18.2■□□□□ 0.5
TFF1P04155 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TFF1P04155 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TFF1P04155 MIR939-201ENST00000401314 82 ntBASIC18.2■□□□□ 0.5
TFF1P04155 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.2■□□□□ 0.5
TFF1P04155 AC005837.3-201ENST00000612163 286 ntBASIC18.2■□□□□ 0.5
TFF1P04155 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TFF1P04155 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TFF1P04155 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TFF1P04155 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.19■□□□□ 0.5
TFF1P04155 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.19■□□□□ 0.5
TFF1P04155 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TFF1P04155 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.19■□□□□ 0.5
TFF1P04155 SUDS3P1-201ENST00000505831 966 ntBASIC18.19■□□□□ 0.5
TFF1P04155 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.19■□□□□ 0.5
TFF1P04155 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TFF1P04155 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TFF1P04155 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TFF1P04155 LINC00565-201ENST00000562710 2331 ntBASIC18.18■□□□□ 0.5
TFF1P04155 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.18■□□□□ 0.5
TFF1P04155 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TFF1P04155 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.18■□□□□ 0.5
TFF1P04155 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.18■□□□□ 0.5
TFF1P04155 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TFF1P04155 AC010141.3-201ENST00000456659 717 ntBASIC18.18■□□□□ 0.5
TFF1P04155 AC027682.1-201ENST00000562846 899 ntBASIC18.18■□□□□ 0.5
TFF1P04155 AC142381.2-201ENST00000566120 298 ntBASIC18.18■□□□□ 0.5
TFF1P04155 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TFF1P04155 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.18■□□□□ 0.5
TFF1P04155 TSPY26P-201ENST00000476365 1326 ntBASIC18.18■□□□□ 0.5
TFF1P04155 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TFF1P04155 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms