Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC026471.6-201ENST00000622954 1905 ntBASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 TSPY9P-201ENST00000440215 945 ntBASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 TSPY11P-201ENST00000442607 1045 ntBASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC079089.2-201ENST00000531211 1277 ntBASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 AL451085.2-201ENST00000605085 799 ntBASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
TRBV5-3A0A0A0MS03 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 AL117332.1-201ENST00000622628 974 ntBASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC241377.3-202ENST00000626088 1088 ntBASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC241585.3-202ENST00000628937 1088 ntBASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC245100.8-202ENST00000629247 1058 ntBASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV5-3A0A0A0MS03 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 FEM1AP4-201ENST00000443167 1987 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 RARRES2P1-201ENST00000474487 481 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC009299.2-201ENST00000482477 511 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 MIR6724-1-201ENST00000616420 92 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 MIR6724-2-201ENST00000616483 92 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 MIR6724-4-201ENST00000617390 92 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 MIR6724-3-201ENST00000622482 92 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC133637.1-201ENST00000624115 1537 ntBASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.36■□□□□ 0.85
TRBV5-3A0A0A0MS03 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-3A0A0A0MS03 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC006455.2-201ENST00000429931 906 ntBASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 UNC93B8-201ENST00000511903 705 ntBASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-3A0A0A0MS03 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRBV5-3A0A0A0MS03 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-3A0A0A0MS03 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV5-3A0A0A0MS03 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-3A0A0A0MS03 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV5-3A0A0A0MS03 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.33■□□□□ 0.85
TRBV5-3A0A0A0MS03 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV5-3A0A0A0MS03 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV5-3A0A0A0MS03 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV5-3A0A0A0MS03 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms