Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC33.49■■■□□ 2.95
COL17A1Q9UMD9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 MKRN4P-201ENST00000444706 1521 ntBASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
COL17A1Q9UMD9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 AP001160.3-201ENST00000601484 763 ntBASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 LINC01529-204ENST00000636474 1715 ntBASIC33.47■■■□□ 2.95
COL17A1Q9UMD9 AC005224.4-201ENST00000583262 1652 ntBASIC33.46■■■□□ 2.95
COL17A1Q9UMD9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC33.46■■■□□ 2.95
COL17A1Q9UMD9 AC144652.1-201ENST00000609974 1624 ntBASIC33.46■■■□□ 2.95
COL17A1Q9UMD9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC33.46■■■□□ 2.95
COL17A1Q9UMD9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC33.46■■■□□ 2.95
COL17A1Q9UMD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC33.46■■■□□ 2.95
COL17A1Q9UMD9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
COL17A1Q9UMD9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.95
COL17A1Q9UMD9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC33.45■■■□□ 2.95
COL17A1Q9UMD9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC33.45■■■□□ 2.95
COL17A1Q9UMD9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC33.45■■■□□ 2.95
COL17A1Q9UMD9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 AC068338.2-201ENST00000563278 1430 ntBASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC33.44■■■□□ 2.94
COL17A1Q9UMD9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 AC093787.1-201ENST00000450396 207 ntBASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 AC073912.3-201ENST00000624414 853 ntBASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94
COL17A1Q9UMD9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
COL17A1Q9UMD9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC33.42■■■□□ 2.94
COL17A1Q9UMD9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC33.41■■■□□ 2.94
COL17A1Q9UMD9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
COL17A1Q9UMD9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC33.41■■■□□ 2.94
COL17A1Q9UMD9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
COL17A1Q9UMD9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC33.41■■■□□ 2.94
COL17A1Q9UMD9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
COL17A1Q9UMD9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
COL17A1Q9UMD9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC33.4■■■□□ 2.94
COL17A1Q9UMD9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 DUSP8P4-201ENST00000399538 1761 ntBASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL17A1Q9UMD9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 AC010141.3-201ENST00000456659 717 ntBASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC33.38■■■□□ 2.93
COL17A1Q9UMD9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC33.37■■■□□ 2.93
COL17A1Q9UMD9 AC068587.7-201ENST00000641602 218 ntBASIC33.37■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms