Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	TAF8	YML114C	1533 nt		4.23	□□□□□ -1.73
RPC53	P25441	RMD5	YDR255C	1266 nt		4.23	□□□□□ -1.73
RPC53	P25441	YDR391C	YDR391C	699 nt		4.23	□□□□□ -1.73
RPC53	P25441	YSA1	YBR111C	696 nt		4.23	□□□□□ -1.73
RPC53	P25441	UTP6	YDR449C	1323 nt		4.22	□□□□□ -1.73
RPC53	P25441	MAG1	YER142C	891 nt		4.22	□□□□□ -1.73
RPC53	P25441	YOR314W	YOR314W	330 nt		4.22	□□□□□ -1.73
RPC53	P25441	NAT1	YDL040C	2565 nt		4.22	□□□□□ -1.73
RPC53	P25441	AGA1	YNR044W	2178 nt		4.21	□□□□□ -1.73
RPC53	P25441	PRP3	YDR473C	1410 nt		4.21	□□□□□ -1.73
RPC53	P25441	RSC3	YDR303C	2658 nt		4.21	□□□□□ -1.73
RPC53	P25441	TRE2	YOR256C	2430 nt		4.21	□□□□□ -1.74
RPC53	P25441	RPC11	YDR045C	333 nt		4.21	□□□□□ -1.74
RPC53	P25441	SHU2	YDR078C	672 nt		4.21	□□□□□ -1.74
RPC53	P25441	RSF1	YMR030W	1131 nt		4.21	□□□□□ -1.74
RPC53	P25441	RUF21	RUF21	707 nt		4.21	□□□□□ -1.74
RPC53	P25441	IAH1	YOR126C	717 nt		4.21	□□□□□ -1.74
RPC53	P25441	YOR186W	YOR186W	435 nt		4.21	□□□□□ -1.74
RPC53	P25441	PNT1	YOR266W	1272 nt		4.21	□□□□□ -1.74
RPC53	P25441	YOR338W	YOR338W	1092 nt		4.21	□□□□□ -1.74
RPC53	P25441	YPL162C	YPL162C	822 nt		4.21	□□□□□ -1.74
RPC53	P25441	VHS3	YOR054C	2025 nt		4.21	□□□□□ -1.74
RPC53	P25441	BIK1	YCL029C	1323 nt		4.21	□□□□□ -1.74
RPC53	P25441	VMA1	YDL185W	3216 nt		4.2	□□□□□ -1.74
RPC53	P25441	LTV1	YKL143W	1392 nt		4.2	□□□□□ -1.74
RPC53	P25441	YCL076W	YCL076W	744 nt		4.2	□□□□□ -1.74
RPC53	P25441	YDL026W	YDL026W	312 nt		4.2	□□□□□ -1.74
RPC53	P25441	YDR290W	YDR290W	330 nt		4.2	□□□□□ -1.74
RPC53	P25441	SPO20	YMR017W	1194 nt		4.2	□□□□□ -1.74
RPC53	P25441	MCM1	YMR043W	861 nt		4.2	□□□□□ -1.74
RPC53	P25441	ASI2	YNL159C	870 nt		4.2	□□□□□ -1.74
RPC53	P25441	GAL11	YOL051W	3246 nt		4.2	□□□□□ -1.74
RPC53	P25441	RPB2	YOR151C	3675 nt		4.2	□□□□□ -1.74
RPC53	P25441	MTC4	YBR255W	2085 nt		4.2	□□□□□ -1.74
RPC53	P25441	TAF7	YMR227C	1773 nt		4.19	□□□□□ -1.74
RPC53	P25441	YBR238C	YBR238C	2196 nt		4.19	□□□□□ -1.74
RPC53	P25441	RPS0A	YGR214W	759 nt		4.19	□□□□□ -1.74
RPC53	P25441	MTR2	YKL186C	555 nt		4.19	□□□□□ -1.74
RPC53	P25441	NUP85	YJR042W	2235 nt		4.19	□□□□□ -1.74
RPC53	P25441	YVC1	YOR087W	2028 nt		4.19	□□□□□ -1.74
RPC53	P25441	YCR085W	YCR085W	354 nt		4.18	□□□□□ -1.74
RPC53	P25441	IES6	YEL044W	501 nt		4.18	□□□□□ -1.74
RPC53	P25441	YER034W	YER034W	558 nt		4.18	□□□□□ -1.74
RPC53	P25441	MRPL6	YHR147C	645 nt		4.18	□□□□□ -1.74
RPC53	P25441	REC104	YHR157W	549 nt		4.18	□□□□□ -1.74
RPC53	P25441	BAT2	YJR148W	1131 nt		4.18	□□□□□ -1.74
RPC53	P25441	UAF30	YOR295W	687 nt		4.18	□□□□□ -1.74
RPC53	P25441	DSL1	YNL258C	2265 nt		4.18	□□□□□ -1.74
RPC53	P25441	GRS2	YPR081C	1857 nt		4.18	□□□□□ -1.74
RPC53	P25441	CLG1	YGL215W	1359 nt		4.17	□□□□□ -1.74
RPC53	P25441	PPQ1	YPL179W	1650 nt		4.17	□□□□□ -1.74
RPC53	P25441	HAT2	YEL056W	1206 nt		4.17	□□□□□ -1.74
RPC53	P25441	YER076C	YER076C	909 nt		4.17	□□□□□ -1.74
RPC53	P25441	IST1	YNL265C	897 nt		4.17	□□□□□ -1.74
RPC53	P25441	YBR103C-A	YBR103C-A	144 nt		4.17	□□□□□ -1.74
RPC53	P25441	YBR141W-A	YBR141W-A	96 nt		4.17	□□□□□ -1.74
RPC53	P25441	PRP9	YDL030W	1593 nt		4.17	□□□□□ -1.74
RPC53	P25441	ROD1	YOR018W	2514 nt		4.17	□□□□□ -1.74
RPC53	P25441	HAP4	YKL109W	1665 nt		4.16	□□□□□ -1.74
RPC53	P25441	UTP25	YIL091C	2166 nt		4.16	□□□□□ -1.74
RPC53	P25441	COP1	YDL145C	3606 nt		4.16	□□□□□ -1.74
RPC53	P25441	RPS13	YDR064W	456 nt		4.16	□□□□□ -1.74
RPC53	P25441	POP6	YGR030C	477 nt		4.16	□□□□□ -1.74
RPC53	P25441	GVP36	YIL041W	981 nt		4.16	□□□□□ -1.74
RPC53	P25441	YAL069W	YAL069W	315 nt		4.16	□□□□□ -1.74
RPC53	P25441	UTP23	YOR004W	765 nt		4.16	□□□□□ -1.74
RPC53	P25441	TMC1	YOR052C	453 nt		4.16	□□□□□ -1.74
RPC53	P25441	DDP1	YOR163W	567 nt		4.16	□□□□□ -1.74
RPC53	P25441	GRX1	YCL035C	333 nt		4.16	□□□□□ -1.74
RPC53	P25441	POF1	YCL047C	777 nt		4.16	□□□□□ -1.74
RPC53	P25441	IMH1	YLR309C	2736 nt		4.16	□□□□□ -1.74
RPC53	P25441	SPT23	YKL020C	3249 nt		4.16	□□□□□ -1.74
RPC53	P25441	MCD4	YKL165C	2760 nt		4.15	□□□□□ -1.74
RPC53	P25441	CAB2	YIL083C	1098 nt		4.15	□□□□□ -1.75
RPC53	P25441	ELF1	YKL160W	438 nt		4.15	□□□□□ -1.75
RPC53	P25441	MCM16	YPR046W	546 nt		4.15	□□□□□ -1.75
RPC53	P25441	EXO70	YJL085W	1872 nt		4.15	□□□□□ -1.75
RPC53	P25441	TRM1	YDR120C	1713 nt		4.15	□□□□□ -1.75
RPC53	P25441	CLN2	YPL256C	1638 nt		4.14	□□□□□ -1.75
RPC53	P25441	UBP12	YJL197W	3765 nt		4.14	□□□□□ -1.75
RPC53	P25441	YGL108C	YGL108C	423 nt		4.14	□□□□□ -1.75
RPC53	P25441	ADH4	YGL256W	1149 nt		4.14	□□□□□ -1.75
RPC53	P25441	RPB3	YIL021W	957 nt		4.14	□□□□□ -1.75
RPC53	P25441	YIL025C	YIL025C	375 nt		4.14	□□□□□ -1.75
RPC53	P25441	SSO2	YMR183C	888 nt		4.14	□□□□□ -1.75
RPC53	P25441	RPL18A	YOL120C	561 nt		4.14	□□□□□ -1.75
RPC53	P25441	IDH2	YOR136W	1110 nt		4.14	□□□□□ -1.75
RPC53	P25441	RFM1	YOR279C	933 nt		4.14	□□□□□ -1.75
RPC53	P25441	GAC1	YOR178C	2382 nt		4.14	□□□□□ -1.75
RPC53	P25441	KIP3	YGL216W	2418 nt		4.14	□□□□□ -1.75
RPC53	P25441	SEG1	YMR086W	2883 nt		4.14	□□□□□ -1.75
RPC53	P25441	SRO7	YPR032W	3102 nt		4.13	□□□□□ -1.75
RPC53	P25441	TPD3	YAL016W	1908 nt		4.13	□□□□□ -1.75
RPC53	P25441	ECM22	YLR228C	2445 nt		4.13	□□□□□ -1.75
RPC53	P25441	YKR015C	YKR015C	1707 nt		4.13	□□□□□ -1.75
RPC53	P25441	CTH1	YDR151C	978 nt		4.13	□□□□□ -1.75
RPC53	P25441	SUP56	tL(CAA)A	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	SUP53	tL(CAA)C	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)D	tL(CAA)D	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)G1	tL(CAA)G1	82 nt		4.13	□□□□□ -1.75

Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms