Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.01■□□□□ 0.79
RPS4Y1P22090 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 AC010525.1-201ENST00000585559 441 ntBASIC20.01■□□□□ 0.79
RPS4Y1P22090 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 AC011298.3-201ENST00000615796 283 ntBASIC20.01■□□□□ 0.79
RPS4Y1P22090 AC136469.2-201ENST00000623944 1028 ntBASIC20.01■□□□□ 0.79
RPS4Y1P22090 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPS4Y1P22090 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y1P22090 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20■□□□□ 0.79
RPS4Y1P22090 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4Y1P22090 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20■□□□□ 0.79
RPS4Y1P22090 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20■□□□□ 0.79
RPS4Y1P22090 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20■□□□□ 0.79
RPS4Y1P22090 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20■□□□□ 0.79
RPS4Y1P22090 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4Y1P22090 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RPS4Y1P22090 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20■□□□□ 0.79
RPS4Y1P22090 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RPS4Y1P22090 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RPS4Y1P22090 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RPS4Y1P22090 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.99■□□□□ 0.79
RPS4Y1P22090 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RPS4Y1P22090 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y1P22090 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 CLDN5-201ENST00000403084 2357 ntBASIC19.98■□□□□ 0.79
RPS4Y1P22090 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RPS4Y1P22090 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y1P22090 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.97■□□□□ 0.79
RPS4Y1P22090 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPS4Y1P22090 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPS4Y1P22090 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPS4Y1P22090 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPS4Y1P22090 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RPS4Y1P22090 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPS4Y1P22090 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RPS4Y1P22090 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.96■□□□□ 0.79
RPS4Y1P22090 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.96■□□□□ 0.79
RPS4Y1P22090 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.96■□□□□ 0.79
RPS4Y1P22090 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPS4Y1P22090 AC010542.4-201ENST00000563151 1910 ntBASIC19.96■□□□□ 0.79
RPS4Y1P22090 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
RPS4Y1P22090 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y1P22090 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y1P22090 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y1P22090 AL136116.3-201ENST00000402907 1138 ntBASIC19.95■□□□□ 0.78
RPS4Y1P22090 AC010141.3-201ENST00000456659 717 ntBASIC19.95■□□□□ 0.78
RPS4Y1P22090 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms