Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFTPBP07988 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SFTPBP07988 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
SFTPBP07988 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SFTPBP07988 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFTPBP07988 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFTPBP07988 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.8■□□□□ 0.6
SFTPBP07988 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.8■□□□□ 0.6
SFTPBP07988 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SFTPBP07988 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SFTPBP07988 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.8■□□□□ 0.6
SFTPBP07988 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.8■□□□□ 0.6
SFTPBP07988 MIR4466-201ENST00000606121 54 ntBASIC18.8■□□□□ 0.6
SFTPBP07988 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.8■□□□□ 0.6
SFTPBP07988 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SFTPBP07988 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFTPBP07988 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.79■□□□□ 0.6
SFTPBP07988 AC009102.2-201ENST00000606772 1639 ntBASIC18.79■□□□□ 0.6
SFTPBP07988 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.79■□□□□ 0.6
SFTPBP07988 AC087742.1-201ENST00000575880 1738 ntBASIC18.79■□□□□ 0.6
SFTPBP07988 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SFTPBP07988 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SFTPBP07988 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
SFTPBP07988 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
SFTPBP07988 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.78■□□□□ 0.6
SFTPBP07988 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SFTPBP07988 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SFTPBP07988 AC007375.3-201ENST00000600936 2314 ntBASIC18.78■□□□□ 0.6
SFTPBP07988 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.78■□□□□ 0.6
SFTPBP07988 AL512631.2-201ENST00000604634 923 ntBASIC18.78■□□□□ 0.6
SFTPBP07988 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.78■□□□□ 0.6
SFTPBP07988 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFTPBP07988 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.78■□□□□ 0.6
SFTPBP07988 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SFTPBP07988 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SFTPBP07988 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SFTPBP07988 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SFTPBP07988 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SFTPBP07988 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SFTPBP07988 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SFTPBP07988 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SFTPBP07988 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SFTPBP07988 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 AL024507.2-201ENST00000606070 2574 ntBASIC18.76■□□□□ 0.59
SFTPBP07988 AC080038.3-201ENST00000623346 1952 ntBASIC18.76■□□□□ 0.59
SFTPBP07988 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.76■□□□□ 0.59
SFTPBP07988 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 DUX4L4-201ENST00000566884 1269 ntBASIC18.76■□□□□ 0.59
SFTPBP07988 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.76■□□□□ 0.59
SFTPBP07988 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SFTPBP07988 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SFTPBP07988 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SFTPBP07988 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SFTPBP07988 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms