Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 PRR2YDL214C 2100 nt4.31□□□□□ -1.72
TY1B-HO13535 MIT1YEL007W 2001 nt4.31□□□□□ -1.72
TY1B-HO13535 YFL051CYFL051C 483 nt4.3□□□□□ -1.72
TY1B-HO13535 YKR073CYKR073C 321 nt4.3□□□□□ -1.72
TY1B-HO13535 TDA5YLR426W 981 nt4.3□□□□□ -1.72
TY1B-HO13535 KTI11YBL071W-A 249 nt4.3□□□□□ -1.72
TY1B-HO13535 HPC2YBR215W 1878 nt4.3□□□□□ -1.72
TY1B-HO13535 YOL019WYOL019W 1656 nt4.3□□□□□ -1.72
TY1B-HO13535 RPP1AYDL081C 321 nt4.3□□□□□ -1.72
TY1B-HO13535 CLB3YDL155W 1284 nt4.3□□□□□ -1.72
TY1B-HO13535 YHR193C-AYHR193C-A 375 nt4.3□□□□□ -1.72
TY1B-HO13535 RAD1YPL022W 3303 nt4.29□□□□□ -1.72
TY1B-HO13535 FZO1YBR179C 2568 nt4.29□□□□□ -1.72
TY1B-HO13535 UBC1YDR177W 648 nt4.29□□□□□ -1.72
TY1B-HO13535 JIP3YLR331C 378 nt4.29□□□□□ -1.72
TY1B-HO13535 ATG18YFR021W 1503 nt4.29□□□□□ -1.72
TY1B-HO13535 JJJ1YNL227C 1773 nt4.29□□□□□ -1.72
TY1B-HO13535 YHR078WYHR078W 1659 nt4.29□□□□□ -1.72
TY1B-HO13535 SMF1YOL122C 1728 nt4.28□□□□□ -1.72
TY1B-HO13535 NEW1YPL226W 3591 nt4.28□□□□□ -1.72
TY1B-HO13535 RPS13YDR064W 456 nt4.28□□□□□ -1.72
TY1B-HO13535 YDR537CYDR537C 606 nt4.28□□□□□ -1.72
TY1B-HO13535 TOS8YGL096W 831 nt4.28□□□□□ -1.72
TY1B-HO13535 YMR085WYMR085W 1299 nt4.28□□□□□ -1.72
TY1B-HO13535 MNN1YER001W 2289 nt4.28□□□□□ -1.72
TY1B-HO13535 GCR2YNL199C 1605 nt4.28□□□□□ -1.72
TY1B-HO13535 MSE1YOL033W 1611 nt4.28□□□□□ -1.72
TY1B-HO13535 EMC1YCL045C 2283 nt4.28□□□□□ -1.73
TY1B-HO13535 SIZ1YDR409W 2715 nt4.27□□□□□ -1.73
TY1B-HO13535 YCL023CYCL023C 348 nt4.27□□□□□ -1.73
TY1B-HO13535 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
TY1B-HO13535 HOF1YMR032W 2010 nt4.26□□□□□ -1.73
TY1B-HO13535 WSS1YHR134W 810 nt4.26□□□□□ -1.73
TY1B-HO13535 YAP5YIR018W 738 nt4.26□□□□□ -1.73
TY1B-HO13535 EMC6YLL014W 327 nt4.26□□□□□ -1.73
TY1B-HO13535 KAR4YCL055W 1008 nt4.26□□□□□ -1.73
TY1B-HO13535 APM4YOL062C 1476 nt4.26□□□□□ -1.73
TY1B-HO13535 MPC54YOR177C 1395 nt4.26□□□□□ -1.73
TY1B-HO13535 YLR374CYLR374C 390 nt4.25□□□□□ -1.73
TY1B-HO13535 RAD33YML011C 534 nt4.25□□□□□ -1.73
TY1B-HO13535 YOR338WYOR338W 1092 nt4.25□□□□□ -1.73
TY1B-HO13535 COM2YER130C 1332 nt4.25□□□□□ -1.73
TY1B-HO13535 CSR2YPR030W 3366 nt4.25□□□□□ -1.73
TY1B-HO13535 SMA2YML066C 1110 nt4.25□□□□□ -1.73
TY1B-HO13535 SDS23YGL056C 1584 nt4.24□□□□□ -1.73
TY1B-HO13535 YEL025CYEL025C 3567 nt4.24□□□□□ -1.73
TY1B-HO13535 PDR1YGL013C 3207 nt4.24□□□□□ -1.73
TY1B-HO13535 MBP1YDL056W 2502 nt4.23□□□□□ -1.73
TY1B-HO13535 PUG1YER185W 912 nt4.23□□□□□ -1.73
TY1B-HO13535 RAD17YOR368W 1206 nt4.23□□□□□ -1.73
TY1B-HO13535 CMD1YBR109C 444 nt4.23□□□□□ -1.73
TY1B-HO13535 SWR1YDR334W 4545 nt4.23□□□□□ -1.73
TY1B-HO13535 OSW7YFR039C 1533 nt4.23□□□□□ -1.73
TY1B-HO13535 STE11YLR362W 2154 nt4.23□□□□□ -1.73
TY1B-HO13535 tW(CCA)G1tW(CCA)G1 72 nt4.22□□□□□ -1.73
TY1B-HO13535 tW(CCA)G2tW(CCA)G2 72 nt4.22□□□□□ -1.73
TY1B-HO13535 tW(CCA)JtW(CCA)J 72 nt4.22□□□□□ -1.73
TY1B-HO13535 tW(CCA)KtW(CCA)K 72 nt4.22□□□□□ -1.73
TY1B-HO13535 tW(CCA)MtW(CCA)M 72 nt4.22□□□□□ -1.73
TY1B-HO13535 tW(CCA)PtW(CCA)P 72 nt4.22□□□□□ -1.73
TY1B-HO13535 SAM37YMR060C 984 nt4.22□□□□□ -1.73
TY1B-HO13535 SAP155YFR040W 3009 nt4.22□□□□□ -1.73
TY1B-HO13535 YGL140CYGL140C 3660 nt4.22□□□□□ -1.73
TY1B-HO13535 MPS2YGL075C 1164 nt4.22□□□□□ -1.73
TY1B-HO13535 LNP1YHR192W 837 nt4.22□□□□□ -1.73
TY1B-HO13535 STP4YDL048C 1473 nt4.22□□□□□ -1.73
TY1B-HO13535 MNL1YHR204W 2391 nt4.21□□□□□ -1.73
TY1B-HO13535 YDR222WYDR222W 1248 nt4.21□□□□□ -1.74
TY1B-HO13535 PHM6YDR281C 315 nt4.21□□□□□ -1.74
TY1B-HO13535 MPC3YGR243W 441 nt4.21□□□□□ -1.74
TY1B-HO13535 UGA3YDL170W 1587 nt4.2□□□□□ -1.74
TY1B-HO13535 YFR032C-BYFR032C-B 264 nt4.2□□□□□ -1.74
TY1B-HO13535 YHR032W-AYHR032W-A 180 nt4.2□□□□□ -1.74
TY1B-HO13535 ASG7YJL170C 630 nt4.2□□□□□ -1.74
TY1B-HO13535 YCL022CYCL022C 516 nt4.2□□□□□ -1.74
TY1B-HO13535 VPS36YLR417W 1701 nt4.2□□□□□ -1.74
TY1B-HO13535 IZH3YLR023C 1632 nt4.2□□□□□ -1.74
TY1B-HO13535 TIS11YLR136C 858 nt4.19□□□□□ -1.74
TY1B-HO13535 GCD1YOR260W 1737 nt4.19□□□□□ -1.74
TY1B-HO13535 RAM1YDL090C 1296 nt4.19□□□□□ -1.74
TY1B-HO13535 LSM12YHR121W 564 nt4.19□□□□□ -1.74
TY1B-HO13535 YSH1YLR277C 2340 nt4.19□□□□□ -1.74
TY1B-HO13535 SCP160YJL080C 3669 nt4.18□□□□□ -1.74
TY1B-HO13535 ARP8YOR141C 2646 nt4.18□□□□□ -1.74
TY1B-HO13535 MCM4YPR019W 2802 nt4.18□□□□□ -1.74
TY1B-HO13535 RPL13AYDL082W 600 nt4.18□□□□□ -1.74
TY1B-HO13535 CNL1YDR357C 369 nt4.18□□□□□ -1.74
TY1B-HO13535 YOR186WYOR186W 435 nt4.18□□□□□ -1.74
TY1B-HO13535 RTT10YPL183C 3042 nt4.18□□□□□ -1.74
TY1B-HO13535 GIN4YDR507C 3429 nt4.17□□□□□ -1.74
TY1B-HO13535 MHO1YJR008W 1017 nt4.17□□□□□ -1.74
TY1B-HO13535 DDI3YNL335W 678 nt4.17□□□□□ -1.74
TY1B-HO13535 YOR385WYOR385W 873 nt4.17□□□□□ -1.74
TY1B-HO13535 SLP1YOR154W 1764 nt4.17□□□□□ -1.74
TY1B-HO13535 ROK1YGL171W 1695 nt4.17□□□□□ -1.74
TY1B-HO13535 STP2YHR006W 1626 nt4.16□□□□□ -1.74
TY1B-HO13535 YRM1YOR172W 2361 nt4.16□□□□□ -1.74
TY1B-HO13535 DAL2YIR029W 1032 nt4.16□□□□□ -1.74
TY1B-HO13535 ANB1YJR047C 474 nt4.16□□□□□ -1.74
TY1B-HO13535 RPL17AYKL180W 555 nt4.16□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms