Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.37■■□□□ 1.33
FOXN3O00409 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
FOXN3O00409 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
FOXN3O00409 DUX4L19-201ENST00000557448 1267 ntBASIC23.37■■□□□ 1.33
FOXN3O00409 AC010525.1-201ENST00000585559 441 ntBASIC23.37■■□□□ 1.33
FOXN3O00409 AC131212.1-201ENST00000613771 668 ntBASIC23.37■■□□□ 1.33
FOXN3O00409 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN3O00409 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.37■■□□□ 1.33
FOXN3O00409 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN3O00409 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.37■■□□□ 1.33
FOXN3O00409 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN3O00409 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN3O00409 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN3O00409 AL136116.3-201ENST00000402907 1138 ntBASIC23.36■■□□□ 1.33
FOXN3O00409 OR2I1P-207ENST00000453522 948 ntBASIC23.36■■□□□ 1.33
FOXN3O00409 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN3O00409 AL138724.1-201ENST00000606771 1088 ntBASIC23.36■■□□□ 1.33
FOXN3O00409 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN3O00409 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN3O00409 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN3O00409 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
FOXN3O00409 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN3O00409 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.35■■□□□ 1.33
FOXN3O00409 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN3O00409 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN3O00409 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN3O00409 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.35■■□□□ 1.33
FOXN3O00409 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN3O00409 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN3O00409 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXN3O00409 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN3O00409 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN3O00409 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN3O00409 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.34■■□□□ 1.33
FOXN3O00409 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN3O00409 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXN3O00409 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXN3O00409 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
FOXN3O00409 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
FOXN3O00409 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.33■■□□□ 1.33
FOXN3O00409 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
FOXN3O00409 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
FOXN3O00409 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.33■■□□□ 1.33
FOXN3O00409 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.33■■□□□ 1.33
FOXN3O00409 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
FOXN3O00409 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FOXN3O00409 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXN3O00409 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXN3O00409 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FOXN3O00409 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FOXN3O00409 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
FOXN3O00409 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
FOXN3O00409 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXN3O00409 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
FOXN3O00409 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.31■■□□□ 1.32
FOXN3O00409 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
FOXN3O00409 AC011298.3-201ENST00000615796 283 ntBASIC23.31■■□□□ 1.32
FOXN3O00409 AC136469.2-201ENST00000623944 1028 ntBASIC23.31■■□□□ 1.32
FOXN3O00409 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
FOXN3O00409 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.31■■□□□ 1.32
FOXN3O00409 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
FOXN3O00409 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXN3O00409 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXN3O00409 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 AC079089.2-201ENST00000531211 1277 ntBASIC23.3■■□□□ 1.32
FOXN3O00409 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXN3O00409 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
FOXN3O00409 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FOXN3O00409 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.29■■□□□ 1.32
FOXN3O00409 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.29■■□□□ 1.32
FOXN3O00409 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
FOXN3O00409 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FOXN3O00409 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms