Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
WDR88Q6ZMY6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 MIR3621-201ENST00000580529 85 ntBASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 AC241377.3-202ENST00000626088 1088 ntBASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 AC241585.3-202ENST00000628937 1088 ntBASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 AC245100.8-202ENST00000629247 1058 ntBASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
WDR88Q6ZMY6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 AC099791.2-201ENST00000605725 427 ntBASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
WDR88Q6ZMY6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 AL356740.2-201ENST00000601559 647 ntBASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
WDR88Q6ZMY6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 pRNA.6-201ENST00000610482 90 ntBASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 pRNA.5-201ENST00000612139 90 ntBASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 pRNA.11-201ENST00000618423 90 ntBASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 pRNA.13-201ENST00000619112 90 ntBASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
WDR88Q6ZMY6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 AC133637.1-201ENST00000624115 1537 ntBASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 AL512631.2-201ENST00000604634 923 ntBASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
WDR88Q6ZMY6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
WDR88Q6ZMY6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
WDR88Q6ZMY6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms