Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.4■□□□□ 0.7
CSNK1A1P48729 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK1A1P48729 AL136162.1-201ENST00000607711 1078 ntBASIC19.4■□□□□ 0.7
CSNK1A1P48729 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CSNK1A1P48729 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK1A1P48729 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1A1P48729 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSNK1A1P48729 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSNK1A1P48729 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSNK1A1P48729 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CSNK1A1P48729 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.39■□□□□ 0.69
CSNK1A1P48729 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CSNK1A1P48729 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CSNK1A1P48729 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.39■□□□□ 0.69
CSNK1A1P48729 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1A1P48729 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 AC096631.2-201ENST00000436136 790 ntBASIC19.38■□□□□ 0.69
CSNK1A1P48729 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.38■□□□□ 0.69
CSNK1A1P48729 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.38■□□□□ 0.69
CSNK1A1P48729 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CSNK1A1P48729 AL031602.1-201ENST00000633169 911 ntBASIC19.38■□□□□ 0.69
CSNK1A1P48729 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CSNK1A1P48729 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1A1P48729 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1A1P48729 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.37■□□□□ 0.69
CSNK1A1P48729 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 AC135279.3-201ENST00000610945 1311 ntBASIC19.37■□□□□ 0.69
CSNK1A1P48729 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1A1P48729 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1A1P48729 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 AC024257.2-201ENST00000549699 147 ntBASIC19.37■□□□□ 0.69
CSNK1A1P48729 AC010525.1-201ENST00000585559 441 ntBASIC19.37■□□□□ 0.69
CSNK1A1P48729 AC068587.7-201ENST00000641602 218 ntBASIC19.37■□□□□ 0.69
CSNK1A1P48729 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1A1P48729 AC242852.2-201ENST00000615738 1807 ntBASIC19.37■□□□□ 0.69
CSNK1A1P48729 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1A1P48729 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CSNK1A1P48729 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1A1P48729 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1A1P48729 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1A1P48729 MIR4767-201ENST00000582827 78 ntBASIC19.36■□□□□ 0.69
CSNK1A1P48729 CA15P2-201ENST00000611168 834 ntBASIC19.36■□□□□ 0.69
CSNK1A1P48729 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CSNK1A1P48729 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CSNK1A1P48729 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1A1P48729 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 AC087239.1-201ENST00000622671 572 ntBASIC19.35■□□□□ 0.69
CSNK1A1P48729 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CSNK1A1P48729 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1A1P48729 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CSNK1A1P48729 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms