Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 MTC7YEL033W 420 nt5.06□□□□□ -1.6
DEF1P35732 RPL22BYFL034C-A 369 nt5.06□□□□□ -1.6
DEF1P35732 RPL24BYGR148C 468 nt5.06□□□□□ -1.6
DEF1P35732 YHL009W-AYHL009W-A 1242 nt5.06□□□□□ -1.6
DEF1P35732 GIC1YHR061C 945 nt5.06□□□□□ -1.6
DEF1P35732 YHR069C-AYHR069C-A 363 nt5.06□□□□□ -1.6
DEF1P35732 PEX18YHR160C 852 nt5.06□□□□□ -1.6
DEF1P35732 YRA2YKL214C 612 nt5.06□□□□□ -1.6
DEF1P35732 SRP40YKR092C 1221 nt5.06□□□□□ -1.6
DEF1P35732 YLR334CYLR334C 381 nt5.06□□□□□ -1.6
DEF1P35732 SAS2YMR127C 1017 nt5.06□□□□□ -1.6
DEF1P35732 MIC27YNL100W 705 nt5.06□□□□□ -1.6
DEF1P35732 IRC13YOR235W 315 nt5.06□□□□□ -1.6
DEF1P35732 FIG1YBR040W 897 nt5.06□□□□□ -1.6
DEF1P35732 SSO1YPL232W 873 nt5.06□□□□□ -1.6
DEF1P35732 YPK9YOR291W 4419 nt5.06□□□□□ -1.6
DEF1P35732 IML2YJL082W 2196 nt5.06□□□□□ -1.6
DEF1P35732 LCB2YDR062W 1686 nt5.05□□□□□ -1.6
DEF1P35732 RSM28YDR494W 1086 nt5.05□□□□□ -1.6
DEF1P35732 YFR009W-AYFR009W-A 258 nt5.05□□□□□ -1.6
DEF1P35732 PNP1YLR209C 936 nt5.05□□□□□ -1.6
DEF1P35732 RIF2YLR453C 1188 nt5.05□□□□□ -1.6
DEF1P35732 YNL277W-AYNL277W-A 189 nt5.05□□□□□ -1.6
DEF1P35732 YBL094CYBL094C 333 nt5.05□□□□□ -1.6
DEF1P35732 YOR238WYOR238W 912 nt5.05□□□□□ -1.6
DEF1P35732 HSP26YBR072W 645 nt5.05□□□□□ -1.6
DEF1P35732 SPP381YBR152W 876 nt5.05□□□□□ -1.6
DEF1P35732 YAP1YML007W 1953 nt5.05□□□□□ -1.6
DEF1P35732 VHS3YOR054C 2025 nt5.04□□□□□ -1.6
DEF1P35732 TOG1YER184C 2385 nt5.04□□□□□ -1.6
DEF1P35732 ATG20YDL113C 1923 nt5.04□□□□□ -1.6
DEF1P35732 MRPS35YGR165W 1038 nt5.04□□□□□ -1.6
DEF1P35732 SAE3YHR079C-A 276 nt5.04□□□□□ -1.6
DEF1P35732 BET4YJL031C 984 nt5.04□□□□□ -1.6
DEF1P35732 YKR047WYKR047W 306 nt5.04□□□□□ -1.6
DEF1P35732 SEC14YMR079W 915 nt5.04□□□□□ -1.6
DEF1P35732 YMR084WYMR084W 789 nt5.04□□□□□ -1.6
DEF1P35732 YNR061CYNR061C 660 nt5.04□□□□□ -1.6
DEF1P35732 snR44snR44 211 nt5.04□□□□□ -1.6
DEF1P35732 YCL001W-AYCL001W-A 462 nt5.04□□□□□ -1.6
DEF1P35732 TRK1YJL129C 3708 nt5.04□□□□□ -1.6
DEF1P35732 TDA6YPR157W 1404 nt5.04□□□□□ -1.6
DEF1P35732 SNF2YOR290C 5112 nt5.04□□□□□ -1.6
DEF1P35732 GAL10YBR019C 2100 nt5.03□□□□□ -1.6
DEF1P35732 VPS45YGL095C 1734 nt5.03□□□□□ -1.6
DEF1P35732 MTH1YDR277C 1302 nt5.03□□□□□ -1.6
DEF1P35732 YJR061WYJR061W 2808 nt5.03□□□□□ -1.6
DEF1P35732 OCA6YDR067C 675 nt5.03□□□□□ -1.6
DEF1P35732 RRP8YDR083W 1179 nt5.03□□□□□ -1.6
DEF1P35732 YDR134CYDR134C 411 nt5.03□□□□□ -1.6
DEF1P35732 TAN1YGL232W 870 nt5.03□□□□□ -1.6
DEF1P35732 RPL27AYHR010W 411 nt5.03□□□□□ -1.6
DEF1P35732 COX6YHR051W 447 nt5.03□□□□□ -1.6
DEF1P35732 LIN1YHR156C 1023 nt5.03□□□□□ -1.6
DEF1P35732 SYS1YJL004C 612 nt5.03□□□□□ -1.6
DEF1P35732 BUD19YJL188C 309 nt5.03□□□□□ -1.6
DEF1P35732 PRM9YAR031W 897 nt5.03□□□□□ -1.6
DEF1P35732 SPS19YNL202W 879 nt5.03□□□□□ -1.6
DEF1P35732 RRG9YNL213C 645 nt5.03□□□□□ -1.6
DEF1P35732 ISU2YOR226C 471 nt5.03□□□□□ -1.6
DEF1P35732 QCR2YPR191W 1107 nt5.03□□□□□ -1.6
DEF1P35732 IXR1YKL032C 1794 nt5.03□□□□□ -1.6
DEF1P35732 YCR085WYCR085W 354 nt5.02□□□□□ -1.61
DEF1P35732 YDL183CYDL183C 963 nt5.02□□□□□ -1.61
DEF1P35732 GRE3YHR104W 984 nt5.02□□□□□ -1.61
DEF1P35732 YHR214WYHR214W 612 nt5.02□□□□□ -1.61
DEF1P35732 YAR066WYAR066W 612 nt5.02□□□□□ -1.61
DEF1P35732 SWC7YLR385C 399 nt5.02□□□□□ -1.61
DEF1P35732 PNG1YPL096W 1092 nt5.02□□□□□ -1.61
DEF1P35732 TRS20YBR254C 528 nt5.02□□□□□ -1.61
DEF1P35732 YCL007CYCL007C 393 nt5.02□□□□□ -1.61
DEF1P35732 GSH2YOL049W 1476 nt5.01□□□□□ -1.61
DEF1P35732 YCR001WYCR001W 315 nt5.01□□□□□ -1.61
DEF1P35732 SCM3YDL139C 672 nt5.01□□□□□ -1.61
DEF1P35732 MF(ALPHA)2YGL089C 363 nt5.01□□□□□ -1.61
DEF1P35732 YIL082WYIL082W 873 nt5.01□□□□□ -1.61
DEF1P35732 SDS3YIL084C 984 nt5.01□□□□□ -1.61
DEF1P35732 AUR1YKL004W 1206 nt5.01□□□□□ -1.61
DEF1P35732 GAT3YLR013W 426 nt5.01□□□□□ -1.61
DEF1P35732 RPN13YLR421C 471 nt5.01□□□□□ -1.61
DEF1P35732 VPS71YML041C 843 nt5.01□□□□□ -1.61
DEF1P35732 SEN15YMR059W 387 nt5.01□□□□□ -1.61
DEF1P35732 snR11snR11 258 nt5.01□□□□□ -1.61
DEF1P35732 YOR105WYOR105W 327 nt5.01□□□□□ -1.61
DEF1P35732 PLP2YOR281C 861 nt5.01□□□□□ -1.61
DEF1P35732 GAS2YLR343W 1668 nt5.01□□□□□ -1.61
DEF1P35732 SPT14YPL175W 1359 nt5.01□□□□□ -1.61
DEF1P35732 KIP2YPL155C 2121 nt5□□□□□ -1.61
DEF1P35732 YER077CYER077C 2067 nt5□□□□□ -1.61
DEF1P35732 AVT3YKL146W 2079 nt5□□□□□ -1.61
DEF1P35732 KIP3YGL216W 2418 nt5□□□□□ -1.61
DEF1P35732 LHP1YDL051W 828 nt5□□□□□ -1.61
DEF1P35732 YGR079WYGR079W 1113 nt5□□□□□ -1.61
DEF1P35732 YIL028WYIL028W 399 nt5□□□□□ -1.61
DEF1P35732 ATP14YLR295C 375 nt5□□□□□ -1.61
DEF1P35732 YLR406C-AYLR406C-A 150 nt5□□□□□ -1.61
DEF1P35732 YNL013CYNL013C 378 nt5□□□□□ -1.61
DEF1P35732 RPA49YNL248C 1248 nt5□□□□□ -1.61
DEF1P35732 NRG2YBR066C 663 nt5□□□□□ -1.61
DEF1P35732 YPR012WYPR012W 255 nt5□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 35.8 ms