Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CSF1P09603 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.8■□□□□ 0.6
CSF1P09603 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.8■□□□□ 0.6
CSF1P09603 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.79■□□□□ 0.6
CSF1P09603 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CSF1P09603 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CSF1P09603 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 AC010542.4-201ENST00000563151 1910 ntBASIC18.79■□□□□ 0.6
CSF1P09603 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.79■□□□□ 0.6
CSF1P09603 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.79■□□□□ 0.6
CSF1P09603 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CSF1P09603 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSF1P09603 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CSF1P09603 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CSF1P09603 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CSF1P09603 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSF1P09603 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSF1P09603 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSF1P09603 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CSF1P09603 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CSF1P09603 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 KRT125P-201ENST00000546827 989 ntBASIC18.77■□□□□ 0.6
CSF1P09603 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSF1P09603 AC008406.3-201ENST00000620001 1374 ntBASIC18.77■□□□□ 0.6
CSF1P09603 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSF1P09603 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CSF1P09603 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CSF1P09603 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.76■□□□□ 0.59
CSF1P09603 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CSF1P09603 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CSF1P09603 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.76■□□□□ 0.59
CSF1P09603 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.76■□□□□ 0.59
CSF1P09603 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.76■□□□□ 0.59
CSF1P09603 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.76■□□□□ 0.59
CSF1P09603 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSF1P09603 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.75■□□□□ 0.59
CSF1P09603 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CSF1P09603 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.75■□□□□ 0.59
CSF1P09603 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.75■□□□□ 0.59
CSF1P09603 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.75■□□□□ 0.59
CSF1P09603 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.75■□□□□ 0.59
CSF1P09603 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 AC011551.1-201ENST00000614101 683 ntBASIC18.75■□□□□ 0.59
CSF1P09603 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.75■□□□□ 0.59
CSF1P09603 AC073130.3-201ENST00000624389 2278 ntBASIC18.75■□□□□ 0.59
CSF1P09603 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSF1P09603 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.74■□□□□ 0.59
CSF1P09603 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CSF1P09603 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CSF1P09603 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.74■□□□□ 0.59
CSF1P09603 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSF1P09603 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms