Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 AL121603.2-201ENST00000557373 2117 ntBASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV9A0A0B4J1U6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 SRD5A1P1-201ENST00000442297 786 ntBASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 AL499627.2-201ENST00000606283 725 ntBASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV9A0A0B4J1U6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 MIR4466-201ENST00000606121 54 ntBASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV9A0A0B4J1U6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 AC131281.2-201ENST00000520478 145 ntBASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 AC092171.4-201ENST00000609130 632 ntBASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV9A0A0B4J1U6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 AC099791.2-201ENST00000605725 427 ntBASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms