Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 AC092171.4-201ENST00000609130 632 ntBASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 pRNA.6-201ENST00000610482 90 ntBASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 pRNA.5-201ENST00000612139 90 ntBASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 pRNA.11-201ENST00000618423 90 ntBASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 pRNA.13-201ENST00000619112 90 ntBASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 AC006455.2-201ENST00000429931 906 ntBASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRGV1A0A0A0MS02 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 AL499627.2-201ENST00000606283 725 ntBASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 AC079834.2-201ENST00000609776 1949 ntBASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV1A0A0A0MS02 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRGV1A0A0A0MS02 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRGV1A0A0A0MS02 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.77■□□□□ 0.11
TRGV1A0A0A0MS02 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TRGV1A0A0A0MS02 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.77■□□□□ 0.11
TRGV1A0A0A0MS02 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 AL512631.2-201ENST00000604634 923 ntBASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 AC131212.1-201ENST00000613771 668 ntBASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 AC133637.1-201ENST00000624115 1537 ntBASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 AC127496.7-201ENST00000625110 1798 ntBASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV1A0A0A0MS02 AC242852.2-201ENST00000615738 1807 ntBASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 EP400NL-214ENST00000641289 2402 ntBASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV1A0A0A0MS02 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms