Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AL451085.2-201ENST00000605085 799 ntBASIC20.35■□□□□ 0.85
CDH15P55291 AL035685.1-201ENST00000636663 812 ntBASIC20.35■□□□□ 0.85
CDH15P55291 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH15P55291 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH15P55291 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH15P55291 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.35■□□□□ 0.85
CDH15P55291 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH15P55291 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH15P55291 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDH15P55291 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH15P55291 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
CDH15P55291 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH15P55291 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH15P55291 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH15P55291 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH15P55291 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH15P55291 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
CDH15P55291 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH15P55291 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH15P55291 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH15P55291 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.33■□□□□ 0.85
CDH15P55291 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH15P55291 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH15P55291 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH15P55291 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH15P55291 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH15P55291 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH15P55291 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH15P55291 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH15P55291 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CDH15P55291 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 AL391422.3-201ENST00000603791 2761 ntBASIC20.32■□□□□ 0.84
CDH15P55291 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH15P55291 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH15P55291 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH15P55291 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH15P55291 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH15P55291 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH15P55291 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH15P55291 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH15P55291 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH15P55291 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH15P55291 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH15P55291 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH15P55291 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH15P55291 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH15P55291 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH15P55291 KRT8P33-201ENST00000508125 1423 ntBASIC20.3■□□□□ 0.84
CDH15P55291 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH15P55291 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH15P55291 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH15P55291 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDH15P55291 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH15P55291 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH15P55291 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH15P55291 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDH15P55291 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH15P55291 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH15P55291 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH15P55291 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDH15P55291 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH15P55291 AC087742.1-201ENST00000575880 1738 ntBASIC20.28■□□□□ 0.84
CDH15P55291 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH15P55291 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH15P55291 YBX1P4-201ENST00000392794 808 ntBASIC20.28■□□□□ 0.84
CDH15P55291 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH15P55291 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH15P55291 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH15P55291 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDH15P55291 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH15P55291 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH15P55291 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH15P55291 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 658.9 ms