Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SFTPBP07988 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.92■□□□□ 0.62
SFTPBP07988 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.91■□□□□ 0.62
SFTPBP07988 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.91■□□□□ 0.62
SFTPBP07988 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.91■□□□□ 0.62
SFTPBP07988 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.91■□□□□ 0.62
SFTPBP07988 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.91■□□□□ 0.62
SFTPBP07988 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
SFTPBP07988 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SFTPBP07988 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.91■□□□□ 0.62
SFTPBP07988 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.9■□□□□ 0.62
SFTPBP07988 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SFTPBP07988 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SFTPBP07988 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.9■□□□□ 0.62
SFTPBP07988 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 LINC00526-201ENST00000581067 1875 ntBASIC18.9■□□□□ 0.62
SFTPBP07988 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SFTPBP07988 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SFTPBP07988 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
SFTPBP07988 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SFTPBP07988 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
SFTPBP07988 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SFTPBP07988 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SFTPBP07988 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SFTPBP07988 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFTPBP07988 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.89■□□□□ 0.61
SFTPBP07988 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.89■□□□□ 0.61
SFTPBP07988 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.89■□□□□ 0.61
SFTPBP07988 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.89■□□□□ 0.61
SFTPBP07988 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SFTPBP07988 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SFTPBP07988 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.89■□□□□ 0.61
SFTPBP07988 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFTPBP07988 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SFTPBP07988 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SFTPBP07988 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.89■□□□□ 0.61
SFTPBP07988 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.88■□□□□ 0.61
SFTPBP07988 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
SFTPBP07988 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.88■□□□□ 0.61
SFTPBP07988 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.88■□□□□ 0.61
SFTPBP07988 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.88■□□□□ 0.61
SFTPBP07988 AC131281.2-201ENST00000520478 145 ntBASIC18.88■□□□□ 0.61
SFTPBP07988 MIR3621-201ENST00000580529 85 ntBASIC18.88■□□□□ 0.61
SFTPBP07988 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SFTPBP07988 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 ESRRAP2-201ENST00000418437 1549 ntBASIC18.88■□□□□ 0.61
SFTPBP07988 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SFTPBP07988 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SFTPBP07988 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SFTPBP07988 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.87■□□□□ 0.61
SFTPBP07988 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SFTPBP07988 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms