Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTSDP07339 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.16■□□□□ 0.5
CTSDP07339 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.16■□□□□ 0.5
CTSDP07339 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTSDP07339 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CTSDP07339 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.15■□□□□ 0.5
CTSDP07339 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSDP07339 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.15■□□□□ 0.5
CTSDP07339 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.15■□□□□ 0.5
CTSDP07339 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSDP07339 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTSDP07339 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CTSDP07339 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTSDP07339 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.15■□□□□ 0.5
CTSDP07339 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTSDP07339 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTSDP07339 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTSDP07339 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CTSDP07339 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CTSDP07339 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.14■□□□□ 0.49
CTSDP07339 NTF6A-201ENST00000591175 560 ntBASIC18.14■□□□□ 0.49
CTSDP07339 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 FP325331.1-202ENST00000623531 1380 ntBASIC18.14■□□□□ 0.49
CTSDP07339 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTSDP07339 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSDP07339 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSDP07339 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSDP07339 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.13■□□□□ 0.49
CTSDP07339 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.13■□□□□ 0.49
CTSDP07339 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTSDP07339 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CTSDP07339 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.13■□□□□ 0.49
CTSDP07339 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSDP07339 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.13■□□□□ 0.49
CTSDP07339 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSDP07339 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSDP07339 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSDP07339 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSDP07339 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSDP07339 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CTSDP07339 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CTSDP07339 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSDP07339 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CTSDP07339 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSDP07339 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTSDP07339 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CTSDP07339 AC009086.3-201ENST00000623486 1008 ntBASIC18.11■□□□□ 0.49
CTSDP07339 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSDP07339 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSDP07339 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CTSDP07339 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CTSDP07339 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSDP07339 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.11■□□□□ 0.49
CTSDP07339 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSDP07339 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSDP07339 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSDP07339 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTSDP07339 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSDP07339 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms