Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSO14618 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSO14618 RPS2P35-201ENST00000443417 897 ntBASIC18.21■□□□□ 0.51
CCSO14618 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSO14618 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSO14618 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.21■□□□□ 0.51
CCSO14618 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSO14618 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCSO14618 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSO14618 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCSO14618 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCSO14618 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.19■□□□□ 0.5
CCSO14618 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 AF106564.1-201ENST00000607058 2553 ntBASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 RPS2P7-201ENST00000447334 885 ntBASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCSO14618 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSO14618 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCSO14618 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.18■□□□□ 0.5
CCSO14618 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCSO14618 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.18■□□□□ 0.5
CCSO14618 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.18■□□□□ 0.5
CCSO14618 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSO14618 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCSO14618 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.17■□□□□ 0.5
CCSO14618 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCSO14618 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSO14618 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCSO14618 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSO14618 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSO14618 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSO14618 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCSO14618 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSO14618 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCSO14618 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.16■□□□□ 0.5
CCSO14618 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCSO14618 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSO14618 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.16■□□□□ 0.5
CCSO14618 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSO14618 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSO14618 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.16■□□□□ 0.5
CCSO14618 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSO14618 AC244015.2-201ENST00000616358 1861 ntBASIC18.16■□□□□ 0.5
CCSO14618 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CCSO14618 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCSO14618 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.15■□□□□ 0.5
CCSO14618 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCSO14618 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCSO14618 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCSO14618 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
CCSO14618 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCSO14618 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.15■□□□□ 0.5
CCSO14618 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCSO14618 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCSO14618 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms