Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 AL358852.1-201ENST00000623174 1268 ntBASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXD3Q9UJU5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 C9orf163-202ENST00000624034 2573 ntBASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXD3Q9UJU5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 YBX1P1-201ENST00000445822 960 ntBASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXD3Q9UJU5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 IGHV3-19-201ENST00000521488 291 ntBASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 TSPY26P-201ENST00000476365 1326 ntBASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD3Q9UJU5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 AC068473.5-201ENST00000616428 2072 ntBASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 SLC47A1P1-202ENST00000449666 945 ntBASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 AL499627.2-201ENST00000606283 725 ntBASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD3Q9UJU5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.64■□□□□ 0.74
FOXD3Q9UJU5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 AC133637.1-201ENST00000624115 1537 ntBASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
FOXD3Q9UJU5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 MIR572-201ENST00000384983 95 ntBASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 AC123595.1-201ENST00000440769 1046 ntBASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 AL354811.1-201ENST00000610286 706 ntBASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXD3Q9UJU5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 AC027612.3-201ENST00000413684 1047 ntBASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD3Q9UJU5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms