Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX18Q96RF0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX18Q96RF0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX18Q96RF0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 MIR4787-201ENST00000607364 84 ntBASIC19.9■□□□□ 0.78
SNX18Q96RF0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX18Q96RF0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNX18Q96RF0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX18Q96RF0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX18Q96RF0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SNX18Q96RF0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX18Q96RF0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 FP325331.1-202ENST00000623531 1380 ntBASIC19.89■□□□□ 0.77
SNX18Q96RF0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX18Q96RF0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX18Q96RF0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 GUSBP5-202ENST00000510805 1989 ntBASIC19.88■□□□□ 0.77
SNX18Q96RF0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.88■□□□□ 0.77
SNX18Q96RF0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 AC073130.3-201ENST00000624389 2278 ntBASIC19.88■□□□□ 0.77
SNX18Q96RF0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX18Q96RF0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX18Q96RF0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX18Q96RF0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX18Q96RF0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX18Q96RF0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX18Q96RF0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX18Q96RF0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX18Q96RF0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX18Q96RF0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX18Q96RF0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SNX18Q96RF0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX18Q96RF0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.86■□□□□ 0.77
SNX18Q96RF0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX18Q96RF0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX18Q96RF0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SNX18Q96RF0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNX18Q96RF0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.85■□□□□ 0.77
SNX18Q96RF0 AC092028.1-203ENST00000608262 953 ntBASIC19.85■□□□□ 0.77
SNX18Q96RF0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNX18Q96RF0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.85■□□□□ 0.77
SNX18Q96RF0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.85■□□□□ 0.77
SNX18Q96RF0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX18Q96RF0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms