Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 YBX1P4-201ENST00000392794 808 ntBASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 AL033527.3-201ENST00000566366 1196 ntBASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 KRT8P33-201ENST00000508125 1423 ntBASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC44A1Q8WWI5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 AC026310.3-201ENST00000625186 2373 ntBASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC44A1Q8WWI5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 FAM99A-202ENST00000538190 1989 ntBASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC44A1Q8WWI5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 AC021242.3-201ENST00000607598 1377 ntBASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC44A1Q8WWI5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC44A1Q8WWI5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.02■■□□□ 1.11
SLC44A1Q8WWI5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC44A1Q8WWI5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC44A1Q8WWI5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC44A1Q8WWI5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC44A1Q8WWI5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC44A1Q8WWI5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SLC44A1Q8WWI5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 AL031848.2-201ENST00000607670 837 ntBASIC22■■□□□ 1.11
SLC44A1Q8WWI5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC44A1Q8WWI5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC44A1Q8WWI5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms