Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 AP003733.4-201ENST00000623785 1697 ntBASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
KRT28Q7Z3Y7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.42
KRT28Q7Z3Y7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
KRT28Q7Z3Y7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 AC083906.2-201ENST00000511578 360 ntBASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 AL121832.2-201ENST00000610979 668 ntBASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 AC068587.7-201ENST00000641602 218 ntBASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
KRT28Q7Z3Y7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
KRT28Q7Z3Y7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC30.18■■■□□ 2.42
KRT28Q7Z3Y7 AC079140.4-201ENST00000507448 529 ntBASIC30.18■■■□□ 2.42
KRT28Q7Z3Y7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
KRT28Q7Z3Y7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
KRT28Q7Z3Y7 AC022211.4-201ENST00000625094 2161 ntBASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
KRT28Q7Z3Y7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KRT28Q7Z3Y7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC30.16■■■□□ 2.42
KRT28Q7Z3Y7 TSPY6P-201ENST00000448518 926 ntBASIC30.16■■■□□ 2.42
KRT28Q7Z3Y7 KRT18P6-201ENST00000555540 1265 ntBASIC30.16■■■□□ 2.42
KRT28Q7Z3Y7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KRT28Q7Z3Y7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
KRT28Q7Z3Y7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 AC010141.3-201ENST00000456659 717 ntBASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KRT28Q7Z3Y7 AC004687.1-201ENST00000579003 1625 ntBASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 GUSBP6-202ENST00000438529 1198 ntBASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.14■■■□□ 2.42
KRT28Q7Z3Y7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KRT28Q7Z3Y7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
KRT28Q7Z3Y7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
KRT28Q7Z3Y7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
KRT28Q7Z3Y7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.12■■■□□ 2.41
KRT28Q7Z3Y7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KRT28Q7Z3Y7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KRT28Q7Z3Y7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 SLC7A5P2-201ENST00000553010 536 ntBASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC30.11■■■□□ 2.41
KRT28Q7Z3Y7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 DUX4L16-201ENST00000555130 1264 ntBASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
KRT28Q7Z3Y7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
KRT28Q7Z3Y7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC30.09■■■□□ 2.41
KRT28Q7Z3Y7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.09■■■□□ 2.41
KRT28Q7Z3Y7 AL138781.1-201ENST00000566567 1274 ntBASIC30.09■■■□□ 2.41
KRT28Q7Z3Y7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC30.09■■■□□ 2.41
KRT28Q7Z3Y7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
KRT28Q7Z3Y7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms