Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-CO2P00403 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MT-CO2P00403 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO2P00403 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-CO2P00403 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-CO2P00403 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO2P00403 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-CO2P00403 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
MT-CO2P00403 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MT-CO2P00403 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-CO2P00403 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-CO2P00403 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.64■□□□□ 0.41
MT-CO2P00403 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-CO2P00403 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-CO2P00403 SNX5-217ENST00000606557 1087 ntBASIC17.64■□□□□ 0.41
MT-CO2P00403 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-CO2P00403 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-CO2P00403 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MT-CO2P00403 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO2P00403 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.64■□□□□ 0.41
MT-CO2P00403 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.63■□□□□ 0.41
MT-CO2P00403 AC137630.3-201ENST00000607245 391 ntBASIC17.63■□□□□ 0.41
MT-CO2P00403 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.63■□□□□ 0.41
MT-CO2P00403 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.63■□□□□ 0.41
MT-CO2P00403 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.63■□□□□ 0.41
MT-CO2P00403 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.63■□□□□ 0.41
MT-CO2P00403 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO2P00403 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-CO2P00403 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MT-CO2P00403 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
MT-CO2P00403 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
MT-CO2P00403 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.62■□□□□ 0.41
MT-CO2P00403 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.62■□□□□ 0.41
MT-CO2P00403 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO2P00403 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-CO2P00403 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.61■□□□□ 0.41
MT-CO2P00403 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MT-CO2P00403 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-CO2P00403 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO2P00403 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO2P00403 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO2P00403 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO2P00403 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO2P00403 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO2P00403 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO2P00403 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MT-CO2P00403 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO2P00403 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.6■□□□□ 0.41
MT-CO2P00403 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.6■□□□□ 0.41
MT-CO2P00403 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
MT-CO2P00403 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MT-CO2P00403 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO2P00403 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-CO2P00403 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO2P00403 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms