Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 SLC7A5P1-201ENST00000568957 537 ntBASIC33.99■■■■□ 3.03
COL17A1Q9UMD9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
COL17A1Q9UMD9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC33.98■■■■□ 3.03
COL17A1Q9UMD9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.98■■■■□ 3.03
COL17A1Q9UMD9 DUSP5P2-201ENST00000426873 1033 ntBASIC33.98■■■■□ 3.03
COL17A1Q9UMD9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC33.98■■■■□ 3.03
COL17A1Q9UMD9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
COL17A1Q9UMD9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
COL17A1Q9UMD9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL17A1Q9UMD9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL17A1Q9UMD9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL17A1Q9UMD9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC33.96■■■■□ 3.03
COL17A1Q9UMD9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL17A1Q9UMD9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL17A1Q9UMD9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC33.95■■■■□ 3.03
COL17A1Q9UMD9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC33.95■■■■□ 3.03
COL17A1Q9UMD9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
COL17A1Q9UMD9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC33.95■■■■□ 3.03
COL17A1Q9UMD9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 RNA5SP413-201ENST00000516373 109 ntBASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC33.95■■■■□ 3.02
COL17A1Q9UMD9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
COL17A1Q9UMD9 SLC6A10P-202ENST00000431994 2058 ntBASIC33.94■■■■□ 3.02
COL17A1Q9UMD9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC33.94■■■■□ 3.02
COL17A1Q9UMD9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
COL17A1Q9UMD9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL17A1Q9UMD9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL17A1Q9UMD9 CNN2P6-201ENST00000439038 900 ntBASIC33.93■■■■□ 3.02
COL17A1Q9UMD9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
COL17A1Q9UMD9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC33.93■■■■□ 3.02
COL17A1Q9UMD9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
COL17A1Q9UMD9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
COL17A1Q9UMD9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
COL17A1Q9UMD9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC33.92■■■■□ 3.02
COL17A1Q9UMD9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
COL17A1Q9UMD9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 ALDH1A3-203ENST00000557963 1670 ntBASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
COL17A1Q9UMD9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC33.89■■■■□ 3.02
COL17A1Q9UMD9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
COL17A1Q9UMD9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC33.89■■■■□ 3.02
COL17A1Q9UMD9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.89■■■■□ 3.02
COL17A1Q9UMD9 UBE2DNL-204ENST00000602536 740 ntBASIC33.89■■■■□ 3.02
COL17A1Q9UMD9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
COL17A1Q9UMD9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 AF201337.1-201ENST00000520239 748 ntBASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC33.88■■■■□ 3.01
COL17A1Q9UMD9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 AC133552.2-202ENST00000575694 574 ntBASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.87■■■■□ 3.01
COL17A1Q9UMD9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC33.86■■■■□ 3.01
COL17A1Q9UMD9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
COL17A1Q9UMD9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC33.86■■■■□ 3.01
COL17A1Q9UMD9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC33.86■■■■□ 3.01
COL17A1Q9UMD9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC33.86■■■■□ 3.01
COL17A1Q9UMD9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
COL17A1Q9UMD9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC33.85■■■■□ 3.01
COL17A1Q9UMD9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
COL17A1Q9UMD9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
COL17A1Q9UMD9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
COL17A1Q9UMD9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms