Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 FP325331.1-202ENST00000623531 1380 ntBASIC20.21■□□□□ 0.83
KRCC1Q9NPI7 KRT8P33-201ENST00000508125 1423 ntBASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 AC103724.3-201ENST00000564481 992 ntBASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 AL031848.2-201ENST00000607670 837 ntBASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 MIR6722-201ENST00000617286 78 ntBASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRCC1Q9NPI7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 AL033527.3-201ENST00000566366 1196 ntBASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KRCC1Q9NPI7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 AC103834.1-201ENST00000520383 144 ntBASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRCC1Q9NPI7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 BX664725.1-201ENST00000438252 379 ntBASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 AC009086.3-201ENST00000623486 1008 ntBASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRCC1Q9NPI7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.16■□□□□ 0.82
KRCC1Q9NPI7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.15■□□□□ 0.82
KRCC1Q9NPI7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRCC1Q9NPI7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRCC1Q9NPI7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms