Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SNRNP40Q96DI7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 BX005040.4-201ENST00000637145 1518 ntBASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 AC006970.2-201ENST00000450065 779 ntBASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP40Q96DI7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.96■□□□□ 0.79
SNRNP40Q96DI7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 KRT19P1-201ENST00000405746 1186 ntBASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 CROCCP5-201ENST00000436658 830 ntBASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 AL109923.1-201ENST00000618799 583 ntBASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP40Q96DI7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 AL355802.2-201ENST00000402069 882 ntBASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP40Q96DI7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 ABHD17AP1-201ENST00000358206 933 ntBASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
SNRNP40Q96DI7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP40Q96DI7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms