Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 BHLHE23-202ENST00000612929 1109 ntBASIC18.84■□□□□ 0.61
LIN54Q6MZP7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LIN54Q6MZP7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.61
LIN54Q6MZP7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LIN54Q6MZP7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN54Q6MZP7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.81■□□□□ 0.6
LIN54Q6MZP7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LIN54Q6MZP7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 AL033527.3-201ENST00000566366 1196 ntBASIC18.79■□□□□ 0.6
LIN54Q6MZP7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 AC074183.2-201ENST00000623112 922 ntBASIC18.79■□□□□ 0.6
LIN54Q6MZP7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.79■□□□□ 0.6
LIN54Q6MZP7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 LONRF2P2-201ENST00000439212 571 ntBASIC18.78■□□□□ 0.6
LIN54Q6MZP7 C11orf96-202ENST00000528572 1834 ntBASIC18.78■□□□□ 0.6
LIN54Q6MZP7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.78■□□□□ 0.6
LIN54Q6MZP7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LIN54Q6MZP7 AC092053.2-201ENST00000640557 1818 ntBASIC18.77■□□□□ 0.6
LIN54Q6MZP7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms