Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL1A2P08123 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
COL1A2P08123 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
COL1A2P08123 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL1A2P08123 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
COL1A2P08123 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.41■■□□□ 1.5
COL1A2P08123 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
COL1A2P08123 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.41■■□□□ 1.5
COL1A2P08123 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L2-201ENST00000561772 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.41■■□□□ 1.5
COL1A2P08123 AC087239.1-201ENST00000622671 572 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L6-201ENST00000626483 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L1-201ENST00000627662 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L8-201ENST00000629013 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L3-201ENST00000630187 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L7-201ENST00000630678 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 DUX4L5-201ENST00000630834 1275 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.41■■□□□ 1.5
COL1A2P08123 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.41■■□□□ 1.5
COL1A2P08123 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.4■■□□□ 1.5
COL1A2P08123 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL1A2P08123 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL1A2P08123 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL1A2P08123 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.4■■□□□ 1.5
COL1A2P08123 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
COL1A2P08123 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.4■■□□□ 1.5
COL1A2P08123 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.4■■□□□ 1.5
COL1A2P08123 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.4■■□□□ 1.5
COL1A2P08123 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL1A2P08123 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.39■■□□□ 1.5
COL1A2P08123 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL1A2P08123 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
COL1A2P08123 ANOS2P-203ENST00000472227 1816 ntBASIC24.39■■□□□ 1.5
COL1A2P08123 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL1A2P08123 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.39■■□□□ 1.49
COL1A2P08123 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.39■■□□□ 1.49
COL1A2P08123 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.39■■□□□ 1.49
COL1A2P08123 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.39■■□□□ 1.49
COL1A2P08123 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL1A2P08123 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A2P08123 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A2P08123 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A2P08123 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A2P08123 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
COL1A2P08123 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A2P08123 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.38■■□□□ 1.49
COL1A2P08123 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A2P08123 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.38■■□□□ 1.49
COL1A2P08123 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.37■■□□□ 1.49
COL1A2P08123 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A2P08123 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A2P08123 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.37■■□□□ 1.49
COL1A2P08123 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
COL1A2P08123 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A2P08123 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.37■■□□□ 1.49
COL1A2P08123 AC010141.3-201ENST00000456659 717 ntBASIC24.37■■□□□ 1.49
COL1A2P08123 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.37■■□□□ 1.49
COL1A2P08123 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A2P08123 CCDC92B-201ENST00000575506 885 ntBASIC24.37■■□□□ 1.49
COL1A2P08123 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A2P08123 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.37■■□□□ 1.49
COL1A2P08123 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A2P08123 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
COL1A2P08123 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.36■■□□□ 1.49
COL1A2P08123 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
COL1A2P08123 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.36■■□□□ 1.49
COL1A2P08123 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.36■■□□□ 1.49
COL1A2P08123 TERF1P2-201ENST00000583350 1212 ntBASIC24.36■■□□□ 1.49
COL1A2P08123 LINC02228-203ENST00000641970 1355 ntBASIC24.36■■□□□ 1.49
COL1A2P08123 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.36■■□□□ 1.49
COL1A2P08123 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A2P08123 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A2P08123 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.35■■□□□ 1.49
COL1A2P08123 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.35■■□□□ 1.49
COL1A2P08123 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
COL1A2P08123 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A2P08123 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
COL1A2P08123 KRT18P5-201ENST00000436075 1291 ntBASIC24.35■■□□□ 1.49
COL1A2P08123 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.35■■□□□ 1.49
COL1A2P08123 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
COL1A2P08123 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A2P08123 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.35■■□□□ 1.49
COL1A2P08123 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COL1A2P08123 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
COL1A2P08123 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL1A2P08123 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.34■■□□□ 1.49
COL1A2P08123 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.34■■□□□ 1.49
COL1A2P08123 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.34■■□□□ 1.49
COL1A2P08123 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A2P08123 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A2P08123 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A2P08123 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
COL1A2P08123 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A2P08123 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
COL1A2P08123 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
COL1A2P08123 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL1A2P08123 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
COL1A2P08123 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms