Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO2P00403 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
MT-CO2P00403 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
MT-CO2P00403 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
MT-CO2P00403 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
MT-CO2P00403 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-CO2P00403 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MT-CO2P00403 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
MT-CO2P00403 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MT-CO2P00403 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO2P00403 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-CO2P00403 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MT-CO2P00403 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 AC103724.3-201ENST00000564481 992 ntBASIC17.69■□□□□ 0.42
MT-CO2P00403 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
MT-CO2P00403 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO2P00403 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MT-CO2P00403 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MT-CO2P00403 ESRRAP2-201ENST00000418437 1549 ntBASIC17.68■□□□□ 0.42
MT-CO2P00403 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
MT-CO2P00403 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO2P00403 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO2P00403 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.68■□□□□ 0.42
MT-CO2P00403 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO2P00403 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-CO2P00403 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO2P00403 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO2P00403 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-CO2P00403 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO2P00403 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MT-CO2P00403 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO2P00403 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO2P00403 AC242852.2-201ENST00000615738 1807 ntBASIC17.67■□□□□ 0.42
MT-CO2P00403 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-CO2P00403 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO2P00403 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MT-CO2P00403 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MT-CO2P00403 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MT-CO2P00403 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 AC079630.1-202ENST00000618127 1840 ntBASIC17.66■□□□□ 0.42
MT-CO2P00403 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MT-CO2P00403 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.66■□□□□ 0.42
MT-CO2P00403 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO2P00403 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO2P00403 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MT-CO2P00403 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO2P00403 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO2P00403 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO2P00403 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-CO2P00403 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MT-CO2P00403 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-CO2P00403 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.65■□□□□ 0.42
MT-CO2P00403 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.65■□□□□ 0.42
MT-CO2P00403 AL031848.2-201ENST00000607670 837 ntBASIC17.65■□□□□ 0.42
MT-CO2P00403 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-CO2P00403 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms