Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SAA2-SAA4A0A096LPE2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.02■□□□□ 0.47
SAA2-SAA4A0A096LPE2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SAA2-SAA4A0A096LPE2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 ECEL1P1-201ENST00000373592 1742 ntBASIC18.01■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AC242852.2-201ENST00000615738 1807 ntBASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AC004687.1-201ENST00000579003 1625 ntBASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SAA2-SAA4A0A096LPE2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LINC00526-201ENST00000581067 1875 ntBASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AC087742.1-201ENST00000575880 1738 ntBASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.99■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AL356740.2-201ENST00000601559 647 ntBASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LINC01960-201ENST00000563759 1884 ntBASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SAA2-SAA4A0A096LPE2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.96■□□□□ 0.47
SAA2-SAA4A0A096LPE2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms