Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF6Q9Y252 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF6Q9Y252 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF6Q9Y252 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.75■□□□□ 0.91
RNF6Q9Y252 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF6Q9Y252 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF6Q9Y252 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF6Q9Y252 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF6Q9Y252 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF6Q9Y252 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF6Q9Y252 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF6Q9Y252 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF6Q9Y252 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RNF6Q9Y252 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 AL024507.2-201ENST00000606070 2574 ntBASIC20.74■□□□□ 0.91
RNF6Q9Y252 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.74■□□□□ 0.91
RNF6Q9Y252 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF6Q9Y252 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RNF6Q9Y252 AC090877.2-201ENST00000558441 1738 ntBASIC20.73■□□□□ 0.91
RNF6Q9Y252 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RNF6Q9Y252 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF6Q9Y252 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF6Q9Y252 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF6Q9Y252 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF6Q9Y252 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 SNX5-217ENST00000606557 1087 ntBASIC20.72■□□□□ 0.91
RNF6Q9Y252 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF6Q9Y252 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF6Q9Y252 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF6Q9Y252 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF6Q9Y252 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF6Q9Y252 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
RNF6Q9Y252 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
RNF6Q9Y252 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF6Q9Y252 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF6Q9Y252 AC007375.3-201ENST00000600936 2314 ntBASIC20.7■□□□□ 0.9
RNF6Q9Y252 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF6Q9Y252 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF6Q9Y252 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF6Q9Y252 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF6Q9Y252 AC133561.4-201ENST00000566112 224 ntBASIC20.69■□□□□ 0.9
RNF6Q9Y252 MIR6722-201ENST00000617286 78 ntBASIC20.69■□□□□ 0.9
RNF6Q9Y252 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RNF6Q9Y252 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF6Q9Y252 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF6Q9Y252 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF6Q9Y252 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF6Q9Y252 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF6Q9Y252 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF6Q9Y252 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF6Q9Y252 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF6Q9Y252 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF6Q9Y252 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms