Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SDF2Q99470 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SDF2Q99470 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.56■□□□□ 0.88
SDF2Q99470 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.56■□□□□ 0.88
SDF2Q99470 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SDF2Q99470 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
SDF2Q99470 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SDF2Q99470 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SDF2Q99470 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SDF2Q99470 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
SDF2Q99470 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.55■□□□□ 0.88
SDF2Q99470 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.55■□□□□ 0.88
SDF2Q99470 AL117332.1-201ENST00000622628 974 ntBASIC20.55■□□□□ 0.88
SDF2Q99470 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.55■□□□□ 0.88
SDF2Q99470 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SDF2Q99470 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SDF2Q99470 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDF2Q99470 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SDF2Q99470 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
SDF2Q99470 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.54■□□□□ 0.88
SDF2Q99470 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SDF2Q99470 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
SDF2Q99470 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.54■□□□□ 0.88
SDF2Q99470 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 AL117328.2-201ENST00000624617 1940 ntBASIC20.54■□□□□ 0.88
SDF2Q99470 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDF2Q99470 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SDF2Q99470 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 ESRRAP2-201ENST00000418437 1549 ntBASIC20.53■□□□□ 0.88
SDF2Q99470 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SDF2Q99470 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.53■□□□□ 0.88
SDF2Q99470 AL356740.2-201ENST00000601559 647 ntBASIC20.53■□□□□ 0.88
SDF2Q99470 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.53■□□□□ 0.88
SDF2Q99470 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDF2Q99470 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.53■□□□□ 0.88
SDF2Q99470 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.52■□□□□ 0.88
SDF2Q99470 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDF2Q99470 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SDF2Q99470 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDF2Q99470 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SDF2Q99470 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SDF2Q99470 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.52■□□□□ 0.88
SDF2Q99470 MIR3621-201ENST00000580529 85 ntBASIC20.52■□□□□ 0.88
SDF2Q99470 AC009086.3-201ENST00000623486 1008 ntBASIC20.52■□□□□ 0.88
SDF2Q99470 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SDF2Q99470 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SDF2Q99470 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDF2Q99470 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.52■□□□□ 0.88
SDF2Q99470 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDF2Q99470 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SDF2Q99470 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
SDF2Q99470 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SDF2Q99470 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDF2Q99470 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.5■□□□□ 0.87
SDF2Q99470 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms