Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
XRN1Q8IZH2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
XRN1Q8IZH2 AL355802.2-201ENST00000402069 882 ntBASIC31.44■■■□□ 2.62
XRN1Q8IZH2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.44■■■□□ 2.62
XRN1Q8IZH2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
XRN1Q8IZH2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
XRN1Q8IZH2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
XRN1Q8IZH2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
XRN1Q8IZH2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.42■■■□□ 2.62
XRN1Q8IZH2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
XRN1Q8IZH2 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.41■■■□□ 2.62
XRN1Q8IZH2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 BID-214ENST00000617586 542 ntTSL 5 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.41■■■□□ 2.62
XRN1Q8IZH2 FP325331.1-202ENST00000623531 1380 ntBASIC31.4■■■□□ 2.62
XRN1Q8IZH2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
XRN1Q8IZH2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
XRN1Q8IZH2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.39■■■□□ 2.61
XRN1Q8IZH2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
XRN1Q8IZH2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
XRN1Q8IZH2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.38■■■□□ 2.61
XRN1Q8IZH2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.38■■■□□ 2.61
XRN1Q8IZH2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
XRN1Q8IZH2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.37■■■□□ 2.61
XRN1Q8IZH2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.36■■■□□ 2.61
XRN1Q8IZH2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
XRN1Q8IZH2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
XRN1Q8IZH2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.36■■■□□ 2.61
XRN1Q8IZH2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
XRN1Q8IZH2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
XRN1Q8IZH2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
XRN1Q8IZH2 NCF1B-203ENST00000435988 1254 ntBASIC31.35■■■□□ 2.61
XRN1Q8IZH2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
XRN1Q8IZH2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
XRN1Q8IZH2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.35■■■□□ 2.61
XRN1Q8IZH2 AC006970.2-201ENST00000450065 779 ntBASIC31.35■■■□□ 2.61
XRN1Q8IZH2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.35■■■□□ 2.61
XRN1Q8IZH2 AC144652.1-201ENST00000609974 1624 ntBASIC31.35■■■□□ 2.61
XRN1Q8IZH2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.34■■■□□ 2.61
XRN1Q8IZH2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
XRN1Q8IZH2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.34■■■□□ 2.61
XRN1Q8IZH2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
XRN1Q8IZH2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
XRN1Q8IZH2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.32■■■□□ 2.61
XRN1Q8IZH2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
XRN1Q8IZH2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
XRN1Q8IZH2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
XRN1Q8IZH2 AL109923.1-201ENST00000618799 583 ntBASIC31.32■■■□□ 2.61
XRN1Q8IZH2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
XRN1Q8IZH2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms