Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.54■□□□□ 0.4
FAM78BQ5VT40 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM78BQ5VT40 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 SPCS2P3-201ENST00000500401 656 ntBASIC17.53■□□□□ 0.4
FAM78BQ5VT40 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 ABHD17AP5-201ENST00000580133 923 ntBASIC17.53■□□□□ 0.4
FAM78BQ5VT40 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.53■□□□□ 0.4
FAM78BQ5VT40 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 DUX4L9-201ENST00000449051 1259 ntBASIC17.52■□□□□ 0.4
FAM78BQ5VT40 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.52■□□□□ 0.4
FAM78BQ5VT40 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FAM78BQ5VT40 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.52■□□□□ 0.39
FAM78BQ5VT40 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.52■□□□□ 0.39
FAM78BQ5VT40 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FAM78BQ5VT40 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 MIR6765-201ENST00000614092 87 ntBASIC17.51■□□□□ 0.39
FAM78BQ5VT40 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM78BQ5VT40 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 KRT18P60-201ENST00000312876 1297 ntBASIC17.5■□□□□ 0.39
FAM78BQ5VT40 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FAM78BQ5VT40 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
FAM78BQ5VT40 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms