Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NDUFA1O15239 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NDUFA1O15239 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NDUFA1O15239 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.17■□□□□ 0.02
NDUFA1O15239 RARRES2P2-201ENST00000394842 485 ntBASIC15.17■□□□□ 0.02
NDUFA1O15239 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 DUX4L9-201ENST00000449051 1259 ntBASIC15.17■□□□□ 0.02
NDUFA1O15239 SPCS2P3-201ENST00000500401 656 ntBASIC15.17■□□□□ 0.02
NDUFA1O15239 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.17■□□□□ 0.02
NDUFA1O15239 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.17■□□□□ 0.02
NDUFA1O15239 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NDUFA1O15239 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA1O15239 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.17■□□□□ 0.02
NDUFA1O15239 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.16■□□□□ 0.02
NDUFA1O15239 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.16■□□□□ 0.02
NDUFA1O15239 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA1O15239 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NDUFA1O15239 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA1O15239 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA1O15239 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA1O15239 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA1O15239 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NDUFA1O15239 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
NDUFA1O15239 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.16■□□□□ 0.02
NDUFA1O15239 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA1O15239 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA1O15239 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA1O15239 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA1O15239 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFA1O15239 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFA1O15239 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA1O15239 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.15■□□□□ 0.02
NDUFA1O15239 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFA1O15239 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA1O15239 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFA1O15239 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA1O15239 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFA1O15239 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFA1O15239 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFA1O15239 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NDUFA1O15239 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFA1O15239 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NDUFA1O15239 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.14■□□□□ 0.01
NDUFA1O15239 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
NDUFA1O15239 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.14■□□□□ 0.01
NDUFA1O15239 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFA1O15239 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 AC139530.1-201ENST00000575312 1977 ntBASIC15.14■□□□□ 0.01
NDUFA1O15239 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA1O15239 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NDUFA1O15239 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 SLC25A24-204ENST00000569674 2357 ntBASIC15.13■□□□□ 0.01
NDUFA1O15239 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NDUFA1O15239 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFA1O15239 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFA1O15239 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFA1O15239 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFA1O15239 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFA1O15239 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFA1O15239 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFA1O15239 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFA1O15239 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NDUFA1O15239 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NDUFA1O15239 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NDUFA1O15239 AL022069.1-201ENST00000568025 1636 ntBASIC15.12■□□□□ 0.01
NDUFA1O15239 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms