Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RTTNQ86VV8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.63■□□□□ 0.73
RTTNQ86VV8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTTNQ86VV8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 ANOS2P-203ENST00000472227 1816 ntBASIC19.63■□□□□ 0.73
RTTNQ86VV8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RTTNQ86VV8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTTNQ86VV8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTTNQ86VV8 AC009102.2-201ENST00000606772 1639 ntBASIC19.63■□□□□ 0.73
RTTNQ86VV8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTTNQ86VV8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.62■□□□□ 0.73
RTTNQ86VV8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTTNQ86VV8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.62■□□□□ 0.73
RTTNQ86VV8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTTNQ86VV8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RTTNQ86VV8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTTNQ86VV8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.62■□□□□ 0.73
RTTNQ86VV8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.62■□□□□ 0.73
RTTNQ86VV8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
RTTNQ86VV8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTTNQ86VV8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.61■□□□□ 0.73
RTTNQ86VV8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTTNQ86VV8 AC135279.3-201ENST00000610945 1311 ntBASIC19.61■□□□□ 0.73
RTTNQ86VV8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.61■□□□□ 0.73
RTTNQ86VV8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RTTNQ86VV8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTTNQ86VV8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTTNQ86VV8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTTNQ86VV8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.61■□□□□ 0.73
RTTNQ86VV8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.6■□□□□ 0.73
RTTNQ86VV8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTTNQ86VV8 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.6■□□□□ 0.73
RTTNQ86VV8 AL512631.2-201ENST00000604634 923 ntBASIC19.6■□□□□ 0.73
RTTNQ86VV8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTTNQ86VV8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTTNQ86VV8 AC092068.2-201ENST00000590491 1708 ntBASIC19.6■□□□□ 0.73
RTTNQ86VV8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.6■□□□□ 0.73
RTTNQ86VV8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RTTNQ86VV8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTTNQ86VV8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.6■□□□□ 0.73
RTTNQ86VV8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTTNQ86VV8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.59■□□□□ 0.73
RTTNQ86VV8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RTTNQ86VV8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.59■□□□□ 0.73
RTTNQ86VV8 DUSP8P5-201ENST00000422884 1815 ntBASIC19.59■□□□□ 0.73
RTTNQ86VV8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTTNQ86VV8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTTNQ86VV8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.58■□□□□ 0.73
RTTNQ86VV8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTTNQ86VV8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTTNQ86VV8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTTNQ86VV8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.58■□□□□ 0.73
RTTNQ86VV8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.58■□□□□ 0.73
RTTNQ86VV8 C17orf82-201ENST00000623772 1530 ntBASIC19.58■□□□□ 0.73
RTTNQ86VV8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RTTNQ86VV8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTTNQ86VV8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTTNQ86VV8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RTTNQ86VV8 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.57■□□□□ 0.72
RTTNQ86VV8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTTNQ86VV8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTTNQ86VV8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTTNQ86VV8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.57■□□□□ 0.72
RTTNQ86VV8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.57■□□□□ 0.72
RTTNQ86VV8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.57■□□□□ 0.72
RTTNQ86VV8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTTNQ86VV8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RTTNQ86VV8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTTNQ86VV8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTTNQ86VV8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTTNQ86VV8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTTNQ86VV8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTTNQ86VV8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTTNQ86VV8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTTNQ86VV8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RTTNQ86VV8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTTNQ86VV8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RTTNQ86VV8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTTNQ86VV8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTTNQ86VV8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RTTNQ86VV8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.55■□□□□ 0.72
RTTNQ86VV8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTTNQ86VV8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTTNQ86VV8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RTTNQ86VV8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.54■□□□□ 0.72
RTTNQ86VV8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTTNQ86VV8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTTNQ86VV8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTTNQ86VV8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTTNQ86VV8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms