Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI3Q3KNW1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 GUSBP5-201ENST00000418136 578 ntBASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI3Q3KNW1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.33■□□□□ 0.69
SNAI3Q3KNW1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNAI3Q3KNW1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SNAI3Q3KNW1 AC233723.2-201ENST00000623798 2106 ntBASIC19.33■□□□□ 0.69
SNAI3Q3KNW1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNAI3Q3KNW1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 KRT16P3-201ENST00000439127 1283 ntBASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 MIR6724-1-201ENST00000616420 92 ntBASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 MIR6724-2-201ENST00000616483 92 ntBASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 MIR6724-4-201ENST00000617390 92 ntBASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 MIR6724-3-201ENST00000622482 92 ntBASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNAI3Q3KNW1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.32■□□□□ 0.68
SNAI3Q3KNW1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 LINC01529-204ENST00000636474 1715 ntBASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNAI3Q3KNW1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAI3Q3KNW1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 FP325331.1-202ENST00000623531 1380 ntBASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAI3Q3KNW1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms