Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.65■□□□□ 0.74
ODF4Q2M2E3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.64■□□□□ 0.74
ODF4Q2M2E3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.64■□□□□ 0.74
ODF4Q2M2E3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ODF4Q2M2E3 LINC00526-201ENST00000581067 1875 ntBASIC19.63■□□□□ 0.73
ODF4Q2M2E3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 TSPY13P-201ENST00000338964 914 ntBASIC19.63■□□□□ 0.73
ODF4Q2M2E3 KRT18P24-201ENST00000344739 1156 ntBASIC19.63■□□□□ 0.73
ODF4Q2M2E3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ODF4Q2M2E3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ODF4Q2M2E3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.61■□□□□ 0.73
ODF4Q2M2E3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 AC074183.2-201ENST00000623112 922 ntBASIC19.6■□□□□ 0.73
ODF4Q2M2E3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 AL353803.4-201ENST00000565882 1934 ntBASIC19.6■□□□□ 0.73
ODF4Q2M2E3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.6■□□□□ 0.73
ODF4Q2M2E3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 AC004448.1-201ENST00000458332 883 ntBASIC19.59■□□□□ 0.73
ODF4Q2M2E3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.59■□□□□ 0.73
ODF4Q2M2E3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms