Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YHR219C-AYHR219C-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YIL177W-AYIL177W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YJL225W-AYJL225W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 RDN5-1RDN5-1 121 nt5.05□□□□□ -1.6
RPN11P43588 YLL066W-AYLL066W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YLL067W-AYLL067W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 RDN5-6RDN5-6 121 nt5.05□□□□□ -1.6
RPN11P43588 YLR466C-AYLR466C-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YLR467C-AYLR467C-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YML133W-BYML133W-B 483 nt5.05□□□□□ -1.6
RPN11P43588 YNL339W-BYNL339W-B 483 nt5.05□□□□□ -1.6
RPN11P43588 YBL113W-AYBL113W-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YOR396C-AYOR396C-A 483 nt5.05□□□□□ -1.6
RPN11P43588 YPL283W-BYPL283W-B 483 nt5.05□□□□□ -1.6
RPN11P43588 YPR204C-AYPR204C-A 483 nt5.05□□□□□ -1.6
RPN11P43588 ARO9YHR137W 1542 nt5.05□□□□□ -1.6
RPN11P43588 APE1YKL103C 1545 nt5.05□□□□□ -1.6
RPN11P43588 NRD1YNL251C 1728 nt5.05□□□□□ -1.6
RPN11P43588 BRE4YDL231C 3378 nt5.04□□□□□ -1.6
RPN11P43588 PMT5YDL093W 2232 nt5.04□□□□□ -1.6
RPN11P43588 YDL183CYDL183C 963 nt5.04□□□□□ -1.6
RPN11P43588 FMP32YFL046W 624 nt5.04□□□□□ -1.6
RPN11P43588 ERV14YGL054C 417 nt5.04□□□□□ -1.6
RPN11P43588 CDC42YLR229C 576 nt5.04□□□□□ -1.6
RPN11P43588 BLS1YLR408C 369 nt5.04□□□□□ -1.6
RPN11P43588 BMT2YBR141C 1014 nt5.04□□□□□ -1.6
RPN11P43588 YNR065CYNR065C 3351 nt5.04□□□□□ -1.6
RPN11P43588 SMP1YBR182C 1359 nt5.04□□□□□ -1.6
RPN11P43588 DEG1YFL001W 1329 nt5.03□□□□□ -1.6
RPN11P43588 RSM10YDR041W 612 nt5.03□□□□□ -1.6
RPN11P43588 OMA1YKR087C 1038 nt5.03□□□□□ -1.6
RPN11P43588 YIM2YMR151W 438 nt5.03□□□□□ -1.6
RPN11P43588 CPA1YOR303W 1236 nt5.03□□□□□ -1.6
RPN11P43588 MNN2YBR015C 1794 nt5.03□□□□□ -1.6
RPN11P43588 YDL071CYDL071C 375 nt5.02□□□□□ -1.61
RPN11P43588 PFA5YDR459C 1125 nt5.02□□□□□ -1.61
RPN11P43588 MRP4YHL004W 1185 nt5.02□□□□□ -1.61
RPN11P43588 SUI3YPL237W 858 nt5.02□□□□□ -1.61
RPN11P43588 FAR8YMR029C 1572 nt5.02□□□□□ -1.61
RPN11P43588 JEN1YKL217W 1851 nt5.02□□□□□ -1.61
RPN11P43588 YER077CYER077C 2067 nt5.01□□□□□ -1.61
RPN11P43588 IXR1YKL032C 1794 nt5.01□□□□□ -1.61
RPN11P43588 YHL045WYHL045W 348 nt5.01□□□□□ -1.61
RPN11P43588 YIL171WYIL171W 330 nt5.01□□□□□ -1.61
RPN11P43588 PAU17YLL025W 375 nt5.01□□□□□ -1.61
RPN11P43588 YMR030W-AYMR030W-A 291 nt5.01□□□□□ -1.61
RPN11P43588 CRZ1YNL027W 2037 nt5.01□□□□□ -1.61
RPN11P43588 PWP1YLR196W 1731 nt5□□□□□ -1.61
RPN11P43588 RAD52YML032C 1416 nt5□□□□□ -1.61
RPN11P43588 DIN7YDR263C 1293 nt5□□□□□ -1.61
RPN11P43588 MOB2YFL034C-B 864 nt5□□□□□ -1.61
RPN11P43588 YSA1YBR111C 696 nt5□□□□□ -1.61
RPN11P43588 CDC28YBR160W 897 nt5□□□□□ -1.61
RPN11P43588 snR3snR3 194 nt5□□□□□ -1.61
RPN11P43588 YBR219CYBR219C 384 nt5□□□□□ -1.61
RPN11P43588 PHO87YCR037C 2772 nt5□□□□□ -1.61
RPN11P43588 UBA1YKL210W 3075 nt5□□□□□ -1.61
RPN11P43588 SED4YCR067C 3198 nt5□□□□□ -1.61
RPN11P43588 STE20YHL007C 2820 nt4.99□□□□□ -1.61
RPN11P43588 PAN1YIR006C 4443 nt4.99□□□□□ -1.61
RPN11P43588 PDE1YGL248W 1110 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)CtQ(UUG)C 72 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)D1tQ(UUG)D1 72 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)D2tQ(UUG)D2 72 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)D3tQ(UUG)D3 72 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)E1tQ(UUG)E1 72 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)HtQ(UUG)H 72 nt4.99□□□□□ -1.61
RPN11P43588 tQ(UUG)LtQ(UUG)L 72 nt4.99□□□□□ -1.61
RPN11P43588 YKL107WYKL107W 930 nt4.99□□□□□ -1.61
RPN11P43588 ISA1YLL027W 753 nt4.99□□□□□ -1.61
RPN11P43588 SNO1YMR095C 675 nt4.99□□□□□ -1.61
RPN11P43588 BUD17YNR027W 954 nt4.99□□□□□ -1.61
RPN11P43588 EIS1YMR031C 2532 nt4.99□□□□□ -1.61
RPN11P43588 AAD3YCR107W 1092 nt4.98□□□□□ -1.61
RPN11P43588 MRT4YKL009W 711 nt4.98□□□□□ -1.61
RPN11P43588 KTR2YKR061W 1278 nt4.98□□□□□ -1.61
RPN11P43588 YLR374CYLR374C 390 nt4.98□□□□□ -1.61
RPN11P43588 HFD1YMR110C 1599 nt4.98□□□□□ -1.61
RPN11P43588 STE13YOR219C 2796 nt4.98□□□□□ -1.61
RPN11P43588 LAS1YKR063C 1509 nt4.97□□□□□ -1.61
RPN11P43588 RMD1YDL001W 1293 nt4.97□□□□□ -1.61
RPN11P43588 YIL047C-AYIL047C-A 369 nt4.97□□□□□ -1.61
RPN11P43588 RHO3YIL118W 696 nt4.97□□□□□ -1.61
RPN11P43588 YMR075C-AYMR075C-A 366 nt4.97□□□□□ -1.61
RPN11P43588 RPL18BYNL301C 561 nt4.97□□□□□ -1.61
RPN11P43588 HXT7YDR342C 1713 nt4.97□□□□□ -1.61
RPN11P43588 HXT6YDR343C 1713 nt4.97□□□□□ -1.61
RPN11P43588 CBP1YJL209W 1965 nt4.96□□□□□ -1.61
RPN11P43588 PUB1YNL016W 1362 nt4.96□□□□□ -1.62
RPN11P43588 YGR017WYGR017W 894 nt4.96□□□□□ -1.62
RPN11P43588 WSS1YHR134W 810 nt4.96□□□□□ -1.62
RPN11P43588 PDR16YNL231C 1056 nt4.96□□□□□ -1.62
RPN11P43588 VPS28YPL065W 729 nt4.96□□□□□ -1.62
RPN11P43588 YPR015CYPR015C 744 nt4.96□□□□□ -1.62
RPN11P43588 ANT1YPR128C 987 nt4.96□□□□□ -1.62
RPN11P43588 SUE1YPR151C 621 nt4.96□□□□□ -1.62
RPN11P43588 MET3YJR010W 1536 nt4.96□□□□□ -1.62
RPN11P43588 YPK3YBR028C 1578 nt4.95□□□□□ -1.62
RPN11P43588 USA1YML029W 2517 nt4.95□□□□□ -1.62
RPN11P43588 CLA4YNL298W 2529 nt4.95□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 20.9 ms