Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRBV5-5A0A0J9YX44 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV5-5A0A0J9YX44 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-5A0A0J9YX44 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-5A0A0J9YX44 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 AC080038.3-201ENST00000623346 1952 ntBASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 MIR4281-201ENST00000580852 62 ntBASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRBV5-5A0A0J9YX44 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 AC139795.1-202ENST00000500444 432 ntBASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-5A0A0J9YX44 AC087742.1-201ENST00000575880 1738 ntBASIC19.39■□□□□ 0.7
TRBV5-5A0A0J9YX44 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
TRBV5-5A0A0J9YX44 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 KRT18P24-201ENST00000344739 1156 ntBASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRBV5-5A0A0J9YX44 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-5A0A0J9YX44 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 THA1P-201ENST00000590384 1145 ntBASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-5A0A0J9YX44 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-5A0A0J9YX44 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-5A0A0J9YX44 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms