Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 AF213884.3-201ENST00000563833 479 ntBASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 AC011298.3-201ENST00000615796 283 ntBASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 AC241377.3-202ENST00000626088 1088 ntBASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 AC241585.3-202ENST00000628937 1088 ntBASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 AC245100.8-202ENST00000629247 1058 ntBASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
FOXD3Q9UJU5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 AC105265.2-201ENST00000467189 838 ntBASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXD3Q9UJU5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD3Q9UJU5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 AP001330.3-201ENST00000520123 633 ntBASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 MIR5787-201ENST00000611784 55 ntBASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FOXD3Q9UJU5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 MIR4767-201ENST00000582827 78 ntBASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 RASA4CP-201ENST00000424092 1398 ntBASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXD3Q9UJU5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 SERBP1P1-201ENST00000396021 1160 ntBASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 AC027682.1-201ENST00000562846 899 ntBASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 AC099791.2-201ENST00000605725 427 ntBASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXD3Q9UJU5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.02■□□□□ 0.79
FOXD3Q9UJU5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.02■□□□□ 0.79
FOXD3Q9UJU5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 AC026271.2-201ENST00000428091 497 ntBASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 AC009102.2-201ENST00000606772 1639 ntBASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
FOXD3Q9UJU5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20■□□□□ 0.79
FOXD3Q9UJU5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
FOXD3Q9UJU5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20■□□□□ 0.79
FOXD3Q9UJU5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20■□□□□ 0.79
FOXD3Q9UJU5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
FOXD3Q9UJU5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
FOXD3Q9UJU5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXD3Q9UJU5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXD3Q9UJU5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms