Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BLOC1S4Q9NUP1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.05■■□□□ 1.6
BLOC1S4Q9NUP1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BLOC1S4Q9NUP1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.04■■□□□ 1.6
BLOC1S4Q9NUP1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.04■■□□□ 1.6
BLOC1S4Q9NUP1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BLOC1S4Q9NUP1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.04■■□□□ 1.6
BLOC1S4Q9NUP1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
BLOC1S4Q9NUP1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 C17orf82-201ENST00000623772 1530 ntBASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
BLOC1S4Q9NUP1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BLOC1S4Q9NUP1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BLOC1S4Q9NUP1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
BLOC1S4Q9NUP1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.02■■□□□ 1.6
BLOC1S4Q9NUP1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
BLOC1S4Q9NUP1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
BLOC1S4Q9NUP1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25■■□□□ 1.59
BLOC1S4Q9NUP1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
BLOC1S4Q9NUP1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25■■□□□ 1.59
BLOC1S4Q9NUP1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
BLOC1S4Q9NUP1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25■■□□□ 1.59
BLOC1S4Q9NUP1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 AL356740.2-201ENST00000601559 647 ntBASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.99■■□□□ 1.59
BLOC1S4Q9NUP1 AC133561.1-201ENST00000568600 2415 ntBASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 FP325331.1-202ENST00000623531 1380 ntBASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 AL512631.2-201ENST00000604634 923 ntBASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.98■■□□□ 1.59
BLOC1S4Q9NUP1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
BLOC1S4Q9NUP1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 LINC01529-204ENST00000636474 1715 ntBASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
BLOC1S4Q9NUP1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
BLOC1S4Q9NUP1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
BLOC1S4Q9NUP1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BLOC1S4Q9NUP1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BLOC1S4Q9NUP1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BLOC1S4Q9NUP1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms