Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.74■□□□□ 0.91
SDF2Q99470 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.74■□□□□ 0.91
SDF2Q99470 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.74■□□□□ 0.91
SDF2Q99470 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SDF2Q99470 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDF2Q99470 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDF2Q99470 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.73■□□□□ 0.91
SDF2Q99470 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SDF2Q99470 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDF2Q99470 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDF2Q99470 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.73■□□□□ 0.91
SDF2Q99470 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDF2Q99470 UNC93B8-201ENST00000511903 705 ntBASIC20.73■□□□□ 0.91
SDF2Q99470 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDF2Q99470 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDF2Q99470 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
SDF2Q99470 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.72■□□□□ 0.91
SDF2Q99470 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.72■□□□□ 0.91
SDF2Q99470 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDF2Q99470 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.72■□□□□ 0.91
SDF2Q99470 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SDF2Q99470 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
SDF2Q99470 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SDF2Q99470 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SDF2Q99470 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SDF2Q99470 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.71■□□□□ 0.91
SDF2Q99470 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.71■□□□□ 0.91
SDF2Q99470 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.71■□□□□ 0.91
SDF2Q99470 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SDF2Q99470 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
SDF2Q99470 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDF2Q99470 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
SDF2Q99470 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDF2Q99470 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.7■□□□□ 0.9
SDF2Q99470 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDF2Q99470 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SDF2Q99470 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDF2Q99470 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDF2Q99470 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDF2Q99470 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.7■□□□□ 0.9
SDF2Q99470 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SDF2Q99470 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.7■□□□□ 0.9
SDF2Q99470 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
SDF2Q99470 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.69■□□□□ 0.9
SDF2Q99470 C1orf229-201ENST00000623686 2258 ntBASIC20.69■□□□□ 0.9
SDF2Q99470 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.69■□□□□ 0.9
SDF2Q99470 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SDF2Q99470 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SDF2Q99470 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SDF2Q99470 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.69■□□□□ 0.9
SDF2Q99470 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDF2Q99470 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SDF2Q99470 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SDF2Q99470 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDF2Q99470 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
SDF2Q99470 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.68■□□□□ 0.9
SDF2Q99470 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDF2Q99470 MIR6724-1-201ENST00000616420 92 ntBASIC20.68■□□□□ 0.9
SDF2Q99470 MIR6724-2-201ENST00000616483 92 ntBASIC20.68■□□□□ 0.9
SDF2Q99470 MIR6724-4-201ENST00000617390 92 ntBASIC20.68■□□□□ 0.9
SDF2Q99470 MIR6724-3-201ENST00000622482 92 ntBASIC20.68■□□□□ 0.9
SDF2Q99470 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SDF2Q99470 FP325331.1-202ENST00000623531 1380 ntBASIC20.68■□□□□ 0.9
SDF2Q99470 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.68■□□□□ 0.9
SDF2Q99470 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDF2Q99470 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SDF2Q99470 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SDF2Q99470 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDF2Q99470 AC009102.2-201ENST00000606772 1639 ntBASIC20.67■□□□□ 0.9
SDF2Q99470 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.67■□□□□ 0.9
SDF2Q99470 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDF2Q99470 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.67■□□□□ 0.9
SDF2Q99470 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.67■□□□□ 0.9
SDF2Q99470 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SDF2Q99470 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SDF2Q99470 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SDF2Q99470 GUSBP5-201ENST00000418136 578 ntBASIC20.66■□□□□ 0.9
SDF2Q99470 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SDF2Q99470 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.66■□□□□ 0.9
SDF2Q99470 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SDF2Q99470 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDF2Q99470 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDF2Q99470 LINC01529-204ENST00000636474 1715 ntBASIC20.66■□□□□ 0.9
SDF2Q99470 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDF2Q99470 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SDF2Q99470 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDF2Q99470 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.65■□□□□ 0.9
SDF2Q99470 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms