Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHCHD1Q96BP2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CHCHD1Q96BP2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHCHD1Q96BP2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 AL161729.1-201ENST00000604104 1402 ntBASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHCHD1Q96BP2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHCHD1Q96BP2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 RNF165-205ENST00000588679 2904 ntBASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHCHD1Q96BP2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHCHD1Q96BP2 MIR219A2-201ENST00000608502 1504 ntBASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHCHD1Q96BP2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.28■□□□□ 0.2
CHCHD1Q96BP2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHCHD1Q96BP2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHCHD1Q96BP2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms